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RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_1
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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3..143
DNA (141bp) protein (47aa)
Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_2
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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186..581
DNA (396bp) protein (132aa)
hypothetical protein Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
hypothetical protein id=2482 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_3
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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625..804
DNA (180bp) protein (60aa)
hypothetical protein Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
hypothetical protein id=136472 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_4
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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826..1506
DNA (681bp) protein (227aa)
coiled-coil 49..70 Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
coiled-coil 49..70 id=8121 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_5
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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comp(1537..2358)
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6FVX1_9CLOT id=8127 bin=ACD15 species=[Clostridium] hiranonis genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
beta-lactamase domain-containing protein Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
beta-lactamase domain-containing protein
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_6
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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comp(2363..3391)
DNA (1029bp) protein (343aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
Methionyl-tRNA formyltransferase n=1 Tax=uncultured bacterium RepID=K2FEM0_9BACT
methionyl-tRNA formyltransferase
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_7
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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comp(3373..3903)
DNA (531bp) protein (177aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
def1; N-formylmethionyl-tRNA deformylase (EC:3.5.1.88); K01462 [EC:3.5.1.88] id=8123 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
def; peptide deformylase (EC:3.5.1.88)
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_8
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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comp(3908..4591)
DNA (684bp) protein (228aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DY90_9BACT
primosomal protein N'
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_9
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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comp(4560..5903)
DNA (1344bp) protein (448aa)
priA; primosome assembly protein PriA; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DY90_9BACT
priA; primosome assembly protein PriA
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_10
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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5984..6526
DNA (543bp) protein (181aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
2'-5' RNA ligase n=1 Tax=uncultured bacterium RepID=K2F145_9BACT
2'-5' RNA ligase
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_11
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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6626..7336
DNA (711bp) protein (237aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187)
Glycosyl transferase WecB/TagA/CpsF family n=1 Tax=uncultured bacterium RepID=K2F157_9BACT
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_12
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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7333..8862
DNA (1530bp) protein (510aa)
Glutamyl/glutaminyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
Glutamate--tRNA ligase n=1 Tax=uncultured bacterium RepID=K2EQG0_9BACT
glutamyl/glutaminyl-tRNA synthetase
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_13
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

8907..10217
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ENE4_9BACT
peptidase M23 Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
peptidase M23
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_14
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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comp(10344..10853)
DNA (510bp) protein (170aa)
M24/M37 family peptidase Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
M24/M37 family peptidase id=8207 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
RBG_19FT_COMBO_OD1_42_6_rbg_19ft_combo_scaffold_5239_15
RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated, Moranbacteria, Parcubacteria, Bacteria

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comp(10941..11324)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E0B7_9BACT
NifU domain-containing protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RBG_19FT_COMBO_OD1_Moranbacteria_42_6_curated
nitrogen fixation protein NifU and related proteins
Displaying 15 items

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