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RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_1
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(2..367)
DNA (366bp) protein (122aa)
dihydrofolate reductase subunit; K00287 dihydrofolate reductase [EC:1.5.1.3] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Dihydrofolate reductase id=2794947 bin=GWC2_Bacteroidetes_33_15 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good +
dihydrofolate reductase subunit
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_2
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(378..1211)
DNA (834bp) protein (278aa)
Thymidylate synthase (EC:2.1.1.45) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UE73_9RHOB id=36088 bin=ACD30 species=Oceanicaulis sp. HTCC2633 genus=Oceanicaulis taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_3
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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1241..1738
DNA (498bp) protein (166aa)
id=2168827 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
id=2168827 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_4
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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1749..2543
DNA (795bp) protein (265aa)
inositol-1-monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
inositol-1-monophosphatase (EC:3.1.3.25)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI0003706464
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_5
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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2600..3883
DNA (1284bp) protein (428aa)
DEAD/DEAH box helicase-like protein n=1 Tax=uncultured bacterium RepID=K1YV46_9BACT
putative DEAD/DEAH box helicase domain protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
putative DEAD/DEAH box helicase domain protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_6
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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3907..4365
DNA (459bp) protein (153aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_7
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(4383..4634)
DNA (252bp) protein (84aa)
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=5803004 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_8
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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4667..5287
DNA (621bp) protein (207aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Peptidase M50 id=5227517 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_9
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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5374..5796
DNA (423bp) protein (141aa)
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
30S ribosomal protein S12 id=5227519 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rpsL; 30S ribosomal protein S12
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_10
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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5823..6293
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q161_9BACT
30S ribosomal protein S7 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
30S ribosomal protein S7
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_11
R_OD1_Nomurabacteria_41_12, Nomurabacteria, Parcubacteria, Bacteria

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6303..8450
DNA (2148bp) protein (716aa)
Elongation factor G n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX81_9BACT
translation elongation factor 2 (ef-2/ef-g); K02355 elongation factor G Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_41_12_curated
translation elongation factor 2 (ef-2/ef-g)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_12
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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8463..9533
DNA (1071bp) protein (357aa)
Dihydroorotate oxidase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQ46_GRAMM
dihydroorotate oxidase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
dihydroorotate oxidase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_13
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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9538..10161
DNA (624bp) protein (208aa)
phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] id=15191205 bin=GWC1_OP11_49_16_COMPLETE species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
phosphoribosyltransferase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_14
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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10158..10958
DNA (801bp) protein (267aa)
orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Orotidine 5'-phosphate decarboxylase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQ48_GRAMM
orotidine 5'-phosphate decarboxylase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_15
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

11056..11487
DNA (432bp) protein (144aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_16
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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11746..12939
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0R6_9BACT
elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Translation elongation factor Tu
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_17
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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12955..13398
DNA (444bp) protein (148aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
30S ribosomal protein S10 id=5227354 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rpsJ; 30S ribosomal protein S10
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_18
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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13435..14049
DNA (615bp) protein (205aa)
50S ribosomal protein L3 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWS8_9BACT
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
rplC; 50S ribosomal protein L3
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_19
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


14086..14745
DNA (660bp) protein (220aa)
rplD; ribosomal protein L4 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=5227352 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplD; ribosomal protein L4
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_20
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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14799..14981
DNA (183bp) protein (61aa)
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
rplW; 50S ribosomal subunit protein L23; K02892 large subunit ribosomal protein L23 id=5802991 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_21
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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14981..15820
DNA (840bp) protein (280aa)
50S ribosomal protein L2, plastid n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0R1_9BACT
ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
ribosomal protein L2
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_22
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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16484..16849
DNA (366bp) protein (122aa)
30S ribosomal protein S19 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZF6_9BACT
rpsS; ribosomal protein S19 (BS19) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
rpsS; ribosomal protein S19 (BS19)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_23
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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16852..17229
DNA (378bp) protein (126aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
50S ribosomal protein L22 id=5227348 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L22
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_24
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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17231..17899
DNA (669bp) protein (223aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQX4_9ZZZZ
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
30S ribosomal protein S3
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_25
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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17912..18340
DNA (429bp) protein (143aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=5227346 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplP; 50S ribosomal protein L16
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_26
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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18345..18587
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_27
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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18600..18875
DNA (276bp) protein (92aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=5803320 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_28
R_OD1_Nomurabacteria_40_12, Nomurabacteria, Parcubacteria, Bacteria

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18929..19300
DNA (372bp) protein (124aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_40_12_curated
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5227344 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L14
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_29
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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19321..19539
DNA (219bp) protein (73aa)
50S ribosomal protein L24 n=1 Tax=Mycoplasma sp. CAG:956 RepID=R5MDV7_9MOLU
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
rplX; 50S ribosomal protein L24
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_5544_30
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


19553..20137
DNA (585bp) protein (195aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5227342 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplE; 50S ribosomal protein L5
Displaying items 1-30 of 49 in total

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