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RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_1
R_OD1_Nomurabacteria_37_25, Nomurabacteria, Parcubacteria, Bacteria

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comp(95..502)
DNA (408bp) protein (136aa)
deoxyhypusine synthase family protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_37_25_curated
Deoxyhypusine synthase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S8I5_9DELT
deoxyhypusine synthase family protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_2
GWB1_OD1_40_7, Nomurabacteria, Parcubacteria, Bacteria

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comp(504..1136)
DNA (633bp) protein (211aa)
Deoxyhypusine synthase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MET9_CORCM
Deoxyhypusine synthase Tax=GWB1_OD1_40_7
dys; deoxyhypusine synthase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1342..2025)
DNA (684bp) protein (228aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIL0_KORVE
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABF43290.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source=
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2257..3105)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037D891E
FliA/WhiG family RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_5
R_OD1_Nomurabacteria_37_25, Nomurabacteria, Parcubacteria, Bacteria

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3240..3482
DNA (243bp) protein (81aa)
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_37_25_curated
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG id=5227223 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
preprotein translocase subunit SecG
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_6
R_OD1_Nomurabacteria_41_12, Nomurabacteria, Parcubacteria, Bacteria

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3506..5284
DNA (1779bp) protein (593aa)
peptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_41_12_curated
Extracellular solute-binding protein family 5 id=4965044 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
peptide ABC transporter substrate-binding protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_7
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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5337..7271
DNA (1935bp) protein (645aa)
RNA-metabolising metallo-beta-lactamase; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
id=5227225 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RNA-metabolising metallo-beta-lactamase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_8
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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7404..8552
DNA (1149bp) protein (383aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Major facilitator superfamily MFS_1 id=4965047 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_9
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(8554..9864)
DNA (1311bp) protein (437aa)
putative HtrA2 peptidase (EC:3.4.21.108) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
putative HtrA2 peptidase (EC:3.4.21.108)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXS6_9BACT
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_10
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(9910..10341)
DNA (432bp) protein (144aa)
aut related protein; K00980 glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] id=84711 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
FMN adenylyltransferase, type 3 archaeal Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
FAD synthetase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_11
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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10474..13047
DNA (2574bp) protein (858aa)
Ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P618_LEIXC
ribonucleotide-diphosphate reductase subunit alpha Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
ribonucleotide-diphosphate reductase subunit alpha
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_12
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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13052..14056
DNA (1005bp) protein (335aa)
nrdB; putative ribonucleoside-diphosphate reductase beta subunit (EC:1.17.4.1) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
nrdF; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleotide-diphosphate reductase subunit beta n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RUQ1_9BACT
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_13
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(14053..14673)
DNA (621bp) protein (207aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
hypothetical protein id=56168 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_14
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(14699..15427)
DNA (729bp) protein (243aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_15
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(15445..16992)
DNA (1548bp) protein (516aa)
guaA; GMP synthase ATPase subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHR5_IGNAJ
guaA; GMP synthase ATPase subunit
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_16
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(17016..18755)
DNA (1740bp) protein (580aa)
ABC transporter related n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XY76_PEDHD
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
ABC transporter
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_17
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(18759..19370)
DNA (612bp) protein (204aa)
cyclophilin-type peptidylprolyl cis-trans isomerase (EC:5.2.1.8); K01802 peptidylprolyl isomerase [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
cyclophilin-type peptidylprolyl cis-trans isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase id=4649067 bin=GWA2_OP3_52_12 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_18
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(19363..19899)
DNA (537bp) protein (179aa)
disulphide bond formation protein; K03611 disulfide bond formation protein DsbB Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB id=5048257 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
disulfide bond formation protein C
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_19
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(19903..20292)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037ADF7A
vitamin K epoxide reductase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_20
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(20406..20786)
DNA (381bp) protein (127aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8XNS0_9BACE
diacylglycerol kinase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_21
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(20855..21073)
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_22
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(21122..22237)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TC90_NIAKG
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_4567_23
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(22368..23459)
DNA (1092bp) protein (364aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
pyrG; CTP synthase PyrG (EC:6.3.4.2)
id=5227275 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Displaying 23 items

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