ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_1
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..714)
DNA (714bp) protein (238aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_2
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

831..2021
DNA (1191bp) protein (397aa)
id=5803402 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
id=5803402 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_3
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2058..3326
DNA (1269bp) protein (423aa)
seg Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
seg id=5803403 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_4
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3375..3620
DNA (246bp) protein (82aa)
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=5803404 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
infA; translation initiation factor IF-1
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_5
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


3861..4241
DNA (381bp) protein (127aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
30S ribosomal protein S13 id=5227101 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rpsM; 30S ribosomal protein S13
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_6
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


4248..4691
DNA (444bp) protein (148aa)
30S ribosomal protein S11 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Ribosomal protein S11 id=5227100 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S11
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_7
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


4710..5312
DNA (603bp) protein (201aa)
30S ribosomal protein S4 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYR4_9BACT
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
rpsD; 30S ribosomal protein S4
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_8
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5394..6353
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=5227098 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_9
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


6379..6732
DNA (354bp) protein (118aa)
50S ribosomal protein L17 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXB1_9BACT
rplQ; 50S ribosomal protein L17 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
rplQ; 50S ribosomal protein L17
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_10
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


6773..7135
DNA (363bp) protein (121aa)
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5803410 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L13
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_11
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


7139..7573
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q012_9BACT
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
30S ribosomal protein S9
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_12
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7715..8380
DNA (666bp) protein (222aa)
Protein GrpE n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYQ9_9BACT
grpE; protein GrpE; K03687 molecular chaperone GrpE Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
grpE; protein GrpE
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_13
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8355..10019
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z5D5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_14
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10074..11807
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q002_9BACT
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_15
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11854..12378)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW36_9BACT
phaN; repressor; K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
phaN; repressor
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_16
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12472..12570
DNA (99bp) protein (33aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_17
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12593..14530
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXA6_9BACT
molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
molecular chaperone DnaK
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_18
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14534..14776
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_19
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14821..17067
DNA (2247bp) protein (749aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
id=5226946 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_20
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

17110..18783
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q002_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_21
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18890..20641
DNA (1752bp) protein (584aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVW3_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_22
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20660..21010
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Putative uncharacterized protein id=4731970 bin=GWC2_OD1_43_27 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_23
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

21010..21303
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_24
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

21305..22837
DNA (1533bp) protein (511aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Putative uncharacterized protein id=5226944 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_25
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

22870..23955
DNA (1086bp) protein (362aa)
dnaJ; chaperone protein; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=5803415 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
dnaJ; chaperone protein DnaJ
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_26
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

23956..24495
DNA (540bp) protein (180aa)
RBBP; Putative esterase (EC:3.-.-.-)
esterase; K07002 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
esterase; K07002 id=15191480 bin=GWC1_OP11_49_16_COMPLETE species=Rickettsia bellii genus=Rickettsia taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_27
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(24492..25850)
DNA (1359bp) protein (453aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteinyl-tRNA synthetase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZZ4_9BACT
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_28
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


25979..26305
DNA (327bp) protein (109aa)
50S ribosomal protein L21 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW17_9BACT
LSU ribosomal protein L21P; K02888 large subunit ribosomal protein L21 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
LSU ribosomal protein L21P
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_29
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(26319..26957)
DNA (639bp) protein (213aa)
recR; recombination protein RecR Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
recR; recombination protein RecR; K06187 recombination protein RecR id=5227071 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
recR; recombination protein RecR
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_1909_30
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(26958..28361)
DNA (1404bp) protein (468aa)
primary replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
id=5227070 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
primary replicative DNA helicase
Displaying items 1-30 of 43 in total

View Taxonomy