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RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_1
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

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279..1811
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWR2_9BACT
metal dependent phosphohydrolase; K06950 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
metal dependent phosphohydrolase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_2
R_OD1_Nomurabacteria_39_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1859..2206
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY42_9BACT
hupB; DNA-binding protein HU-beta Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_39_18_curated
hupB; DNA-binding protein Hu-beta
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_3
R_OD1_Nomurabacteria_37_25, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2347..2913)
DNA (567bp) protein (189aa)
DNA polymerase V subunit; K03503 DNA polymerase V [EC:3.4.21.-] Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_37_25_curated
DNA polymerase V subunit; K03503 DNA polymerase V [EC:3.4.21.-] id=5091491 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
DNA polymerase V subunit
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_4
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3311..4912)
DNA (1602bp) protein (534aa)
Mg chelatase-like protein; K07391 magnesium chelatase family protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
id=5227380 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Mg chelatase-like protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_5
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5018..5374)
DNA (357bp) protein (119aa)
TraR/DksA family transcriptional regulator n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZI6_9BACT
TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
TraR/DksA family transcriptional regulator
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_6
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5456..6358)
DNA (903bp) protein (301aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_7
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6345..8471)
DNA (2127bp) protein (709aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=5803178 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
polyribonucleotide nucleotidyltransferase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
polyribonucleotide nucleotidyltransferase
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_8
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8801..9307)
DNA (507bp) protein (169aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Uncharacterized protein id=5227376 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_9
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(9462..9725)
DNA (264bp) protein (88aa)
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 id=5227375 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S15
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_10
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9839..10774
DNA (936bp) protein (312aa)
putative Tyrosine recombinase xerD Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
recombinase; K04763 integrase/recombinase XerD id=5803170 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tyrosine recombinase XerD
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_11
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10939..11718
DNA (780bp) protein (260aa)
xthA; Exodeoxyribonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Exodeoxyribonuclease III n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWR6_9BACT
xthA; exodeoxyribonuclease III
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_12
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

11841..12464
DNA (624bp) protein (208aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
Putative uncharacterized protein id=5226941 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_13
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12461..13246)
DNA (786bp) protein (262aa)
Transcriptional regulator, TrmB n=1 Tax=uncultured bacterium RepID=K2FC11_9BACT
Transcriptional regulator, TrmB Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
iclR helix-turn-helix domain protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_14
RLO_OD1_Nomurabacteria_37_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13396..13977
DNA (582bp) protein (194aa)
Multidrug resistance protein MdtK n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YA22_TREAZ
multidrug resistance protein MdtK Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_37_8_curated
multidrug resistance protein MdtK
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_15
GWA1_OD1_37_20_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13983..15662
DNA (1680bp) protein (560aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ33314.1}; TaxID=1618729 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_37_20.;"
hypothetical protein id=5098323 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_16
unknown

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15719..15823
DNA (105bp) protein (35aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_17
unknown

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15859..16197
DNA (339bp) protein (113aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_18
GWB1_OD1_40_7, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16210..16467)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D814_9BACT
Uncharacterized protein Tax=GWB1_OD1_40_7
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_19
R_OD1_Nomurabacteria_40_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16469..16735)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B75A65
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_40_18_curated
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_20
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16772..18382)
DNA (1611bp) protein (537aa)
polyA polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
tRNA adenylyltransferase/tRNA cytidylyltransferase (EC:2.7.7.25 2.7.7.21)
id=5227370 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_21
R_OD1_Nomurabacteria_37_25, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18942..19349
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZH9_9BACT
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_37_25_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_22
R_OD1_Nomurabacteria_41_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19476..19874
DNA (399bp) protein (133aa)
transmembrane_regions 7..25 Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_41_18_curated
transmembrane_regions 7..25 id=120602 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_23
R_OD1_Nomurabacteria_46_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19914..20381
DNA (468bp) protein (156aa)
hypothetical protein
transmembrane_regions 5..27 Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_46_18_curated
transmembrane_regions 5..27 id=120601 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_24
GWB1_OD1_54_7, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists

comp(20496..20912)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003748160
Uncharacterized protein {ECO:0000313|EMBL:KKW37713.1}; TaxID=1618607 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Adlerbacteria) bacterium GW2011_GWB1_54_7.;"
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_25
GWF2_OD1_46_218, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

20927..21472
DNA (546bp) protein (182aa)
Metal dependent phosphohydrolase id=1995456 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Metal dependent phosphohydrolase {ECO:0000313|EMBL:KKU33567.1}; TaxID=1619001 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_46_218.;"
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_26
unknown

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21475..22104
DNA (630bp) protein (210aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_27
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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22110..23195
DNA (1086bp) protein (362aa)
ATP-dependent Zn protease id=3707950 bin=GWF2_Lentisphaerae_49_21 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein Tax=GWF2_Lentisphaerae_49_21_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_28
R_OD1_Nomurabacteria_36_29, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23666..24724)
DNA (1059bp) protein (353aa)
metalloendopeptidase-like membrane protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_36_29_curated
peptidase M23 family protein id=5803183 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_12028_29
unknown

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24795..24887
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 29 items

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