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RIFCSPHIGHO2_01_FULL_OD1_37_110_rifcsphigho2_01_scaffold_10284_2

Organism: Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_37_110

partial RP 36 / 55 MC: 1 BSCG 37 / 51 MC: 1 ASCG 7 / 38
Location: 539..1123

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_36_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 183.0
  • Bit_score: 253
  • Evalue 3.00e-64
sigma-24 (FecI-like protein); K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5802740 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 175.0
  • Bit_score: 146
  • Evalue 3.60e-32
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 183.0
  • Bit_score: 112
  • Evalue 1.60e-22

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Taxonomy

R_OD1_Nomurabacteria_36_29 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGCCATATGCCCAGCATGATTTTGGTAAATTAAATGACGAAGAAATAATAGCATTATATAAAAGTGGCGAGAAAGAAGCTTTTAAAAAGCTAATAGACAGATATACAATCCCACTTTACAATTTTACTGCGCGCATAACTAATCGAATTGATACATCTGATATAGTTCAAGAAATTTTTATTAAAATATGGAAGAATCTAAATAATTTTGACAGAGAAAAAGCAAGTTTTAAAACTTGGATTTTCACTATTGCGAGAAATACCGTCATCGATTTTTCAAGAAAAAGAGAGAGGTTATTATTCTCTGATATGGAAAACAATAGTGAAAAAGGTTTAAGCTTTTTTGAAGAAAACATACCAGATGAAAATATAATTCCCTTTGAGGCATTACAAAAATTACAAGACAAGGAATTTTTAAATAATACACTAAAAAAACTACTTCCGGACGAAAACGAGATCTTGGTACTCCATTATCAAGAAGATATGACTTTTGATGAAATAGGTAAGGTTTTAAACAAAAGTTTAAATACAGTAAAAAGCAAGCACAGGAGAACACTCATCAAATTAAGAAAAATGCTTGATTAA
PROTEIN sequence
Length: 195
MPYAQHDFGKLNDEEIIALYKSGEKEAFKKLIDRYTIPLYNFTARITNRIDTSDIVQEIFIKIWKNLNNFDREKASFKTWIFTIARNTVIDFSRKRERLLFSDMENNSEKGLSFFEENIPDENIIPFEALQKLQDKEFLNNTLKKLLPDENEILVLHYQEDMTFDEIGKVLNKSLNTVKSKHRRTLIKLRKMLD*