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RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_1
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

565..978
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R8V3_9THEO
Putative uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_2
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(1432..2121)
DNA (690bp) protein (230aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037CD837
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_3
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(2277..2621)
DNA (345bp) protein (115aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
UPF0109 protein LDC_0451 id=4790133 bin=GWC2_OD1_43_27 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_4
GWF2_OD1_38_8, Parcubacteria, Bacteria

Not on your lists


comp(2738..3106)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036D38F0
30S ribosomal protein S16 Tax=GWF2_OD1_38_8
30S ribosomal protein S16
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_5
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(3197..3883)
DNA (687bp) protein (229aa)
putative ribonuclease III (EC:3.1.26.3) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hypothetical protein id=5801635 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_6
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(3966..4403)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037383A0
putative transcription termination factor Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
putative transcription termination factor
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_7
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(4529..4819)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F3F5F
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
rpmF; 50S ribosomal protein L32
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_8
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(4973..5347)
DNA (375bp) protein (125aa)
Marine sediment metagenome DNA, contig: S06H3_S02967 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_9
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(5398..5901)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036EC748
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_10
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(5913..6410)
DNA (498bp) protein (166aa)
id=4731758 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
id=4731758 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_11
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(6503..7015)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000360F138
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_12
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(7074..7823)
DNA (750bp) protein (250aa)
seg 12..27 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
seg 12..27 id=136810 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_13
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(7933..8772)
DNA (840bp) protein (280aa)
HtrA2 peptidase (EC:3.4.21.108) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
HtrA2 peptidase (EC:3.4.21.108)
Protease Do id=2823838 bin=GWC1_OD1_38_17 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_14
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(8927..9457)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCJ4_ELUMP
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_15
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(9462..10268)
DNA (807bp) protein (269aa)
DNA methylase N-4/N-6 domain-containing protein; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
DNA modification methylase n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GYY5_UNCTG id=5087243 bin=GWF1_OP11_31_35_complete species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
DNA methylase N-4/N-6 domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_16
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(10472..11248)
DNA (777bp) protein (259aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_17
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(11608..12516)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003688D70
ftsX; cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
ftsX; cell division protein FtsX
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_18
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(12652..13332)
DNA (681bp) protein (227aa)
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Cell division ATP-binding protein FtsE id=4242302 bin=GWC2_OD1_43_27 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ftsE; cell division ATP-binding protein FtsE
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_19
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(13338..14078)
DNA (741bp) protein (247aa)
prfB; peptide chain release factor 2; K02836 peptide chain release factor 2 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
det:DET0570 prfB; peptide chain release factor 2, programmed frameshift; K02836 peptide chain release factor RF-2 id=1241929 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
prfB; peptide chain release factor 2
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_20
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(14359..14802)
DNA (444bp) protein (148aa)
id=4838924 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
id=4838924 bin=GWC2_OD1_43_27 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_21
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

14918..15022
DNA (105bp) protein (35aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_22
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(15196..17154)
DNA (1959bp) protein (653aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
GTP-binding protein LepA id=2742390 bin=GWC1_CPR2_39_9 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
GTP-binding protein LepA
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_23
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(17271..18920)
DNA (1650bp) protein (550aa)
integral membrane protein MviN; K03980 virulence factor Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Integral membrane protein MviN id=2073055 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
integral membrane protein MviN
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_24
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(19003..21444)
DNA (2442bp) protein (814aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2APW0_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
GDP-mannose 4,6 dehydratase ISS
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_25
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(21507..22031)
DNA (525bp) protein (175aa)
Glycosyl transferase, group 1 n=1 Tax=uncultured bacterium RepID=K2EYD6_9BACT
group 1 glycosyl transferase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
group 1 glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_26
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(21992..22912)
DNA (921bp) protein (307aa)
Glycosyl transferase, group 1 n=1 Tax=uncultured bacterium RepID=K2ECR1_9BACT
group 1 glycosyl transferase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
glycosyl transferase, group 1
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_27
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(23006..24169)
DNA (1164bp) protein (388aa)
group 1 glycosyl transferase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Glycosyl transferase group 1 id=1924280 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
group 1 glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_28
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(24312..25400)
DNA (1089bp) protein (363aa)
group 1 glycosyl transferase Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
tmt:Tmath_0722 glycosyl transferase group 1 id=130754 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
group 1 glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_29
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(25604..26992)
DNA (1389bp) protein (463aa)
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-)
Putative glycosyltransferase id=3345191 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_40_12b_rifcsphigho2_01_scaffold_4633_30
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(27642..28079)
DNA (438bp) protein (146aa)
ribonuclease H; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
Ribonuclease H id=3345199 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
ribonuclease H
Displaying items 1-30 of 35 in total

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