ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_1
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


3..455
DNA (453bp) protein (151aa)
alaS; alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
id=5227106 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_2
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

460..1641
DNA (1182bp) protein (394aa)
id=5803402 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
id=5803402 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_3
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1644..2885
DNA (1242bp) protein (414aa)
seg Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
seg id=5803403 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_4
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2949..3215
DNA (267bp) protein (89aa)
Translation initiation factor IF-1 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
Translation initiation factor IF-1 id=5227103 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_5
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


3449..3829
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW01_9BACT
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
30S ribosomal protein S13
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_6
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


3902..4363
DNA (462bp) protein (154aa)
Ribosomal protein S11 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q017_9BACT
Ribosomal protein S11 {ECO:0000313|EMBL:KKS24411.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
30S ribosomal protein S11
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_7
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


4382..4984
DNA (603bp) protein (201aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
30S ribosomal protein S4 id=5227099 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S4
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_8
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5054..6016
DNA (963bp) protein (321aa)
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=5227098 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_9
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


6048..6401
DNA (354bp) protein (118aa)
rplQ; 50S ribosomal protein L17 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
50S ribosomal protein L17 id=5227097 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
LSU ribosomal protein L17P
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_10
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


6433..6789
DNA (357bp) protein (119aa)
50S ribosomal protein L13 {ECO:0000313|EMBL:KKS24406.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5803410 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L13
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_11
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


6797..7258
DNA (462bp) protein (154aa)
30S ribosomal protein S9 {ECO:0000313|EMBL:KKS24405.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5227095 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rpsI; 30S ribosomal protein S9
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_12
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7448..8056
DNA (609bp) protein (203aa)
Protein GrpE n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYQ9_9BACT
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
GrpE protein HSP-70 cofactor
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_19479_13
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8086..9639
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z5D5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
hypothetical protein
Displaying 13 items

View Taxonomy