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RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_1
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(235..1041)
DNA (807bp) protein (269aa)
rnhA; ribonuclease HI (EC:3.1.26.4)
RNaseH ribonuclease n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002F140C0
Ribonuclease HI {ECO:0000313|EMBL:KKS05144.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_2
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

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1100..2626
DNA (1527bp) protein (509aa)
hba:Hbal_1635 site-specific DNA-methyltransferase (adenine-specific) (EC:2.1.1.72) id=120079 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:KKS05145.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_3
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2628..3263
DNA (636bp) protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05146.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_4
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3301..5583
DNA (2283bp) protein (761aa)
Type III restriction protein res subunit {ECO:0000313|EMBL:KKS05147.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
hba:Hbal_1634 type III restriction protein res subunit id=120097 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
type III restriction protein res subunit
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_5
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5589..6797
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA278-O22 RepID=UPI00037045CC
Uncharacterized protein {ECO:0000313|EMBL:KKS05148.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_6
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6800..6973
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05149.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_7
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6970..7155
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05150.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_8
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7226..7465)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05151.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_9
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7482..8042)
DNA (561bp) protein (187aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05152.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
id=4790099 bin=GWC2_OD1_43_27 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_10
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8039..8257)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037E8D46
Uncharacterized protein {ECO:0000313|EMBL:KKS05153.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_11
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9187..9615
DNA (429bp) protein (143aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05154.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_12
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9627..9830
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05155.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_13
unknown

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9831..10166
DNA (336bp) protein (112aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_14
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10210..10596
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05156.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_15
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10629..11828
DNA (1200bp) protein (400aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05157.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_16
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12334..12564
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05158.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_17
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12731..12871
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05159.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_18
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12868..13617
DNA (750bp) protein (250aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS05160.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_19
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13707..15317
DNA (1611bp) protein (537aa)
Site-specific recombinase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LV20_SYNAS
Site-specific recombinase {ECO:0000313|EMBL:KKS05161.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
site-specific recombinase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_20
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

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15394..15789
DNA (396bp) protein (132aa)
Site-specific recombinase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LV20_SYNAS
Site-specific recombinase {ECO:0000313|EMBL:KKS05161.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
site-specific recombinase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_21
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15894..17330)
DNA (1437bp) protein (479aa)
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=uncultured bacterium RepID=K2DTA0_9BACT
Glutamine synthetase {ECO:0000313|EMBL:KKS23017.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_22
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(18079..18546)
DNA (468bp) protein (156aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
hypothetical protein; K09005 hypothetical protein id=5095184 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_23
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18556..19959)
DNA (1404bp) protein (468aa)
arginine decarboxylase (EC:4.1.1.19) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
speA; arginine decarboxylase; K01585 arginine decarboxylase [EC:4.1.1.19] id=5095185 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
arginine decarboxylase (EC:4.1.1.19)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_24
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20038..21237)
DNA (1200bp) protein (400aa)
tgt; tRNA-guanine transglycosylase (EC:2.4.2.29) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
queuine tRNA-ribosyltransferase (TGT); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=5803609 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
tgt; tRNA-guanine transglycosylase (EC:2.4.2.29)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_25
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21321..22151)
DNA (831bp) protein (277aa)
Rod shape-determining protein MreC Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
Rod shape-determining protein MreC id=5803380 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_26
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22132..23178)
DNA (1047bp) protein (349aa)
rod shape-determining protein mreb; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
id=5226932 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rod shape-determining protein mreb
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_27
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(23194..24450)
DNA (1257bp) protein (419aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
Prolyl-tRNA synthetase id=5226931 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Prolyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_28
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


24566..25291
DNA (726bp) protein (242aa)
30S ribosomal protein S2 {ECO:0000313|EMBL:KKS24733.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
30S ribosomal protein S2P; K02967 small subunit ribosomal protein S2 id=5226930 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S2
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_29
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

25298..26113
DNA (816bp) protein (272aa)
tsf; translation elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
Elongation factor Ts id=5226929 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
tsf; elongation factor Ts
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_3716_30
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

26124..26525
DNA (402bp) protein (134aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
Displaying items 1-30 of 84 in total

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