ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_3

Organism: Candidatus Nomurabacteria bacterium RIFCSPHIGHO2_01_FULL_41_91

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 11 / 38
Location: 5465..6682

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein {ECO:0000313|EMBL:KKS23143.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 405.0
  • Bit_score: 761
  • Evalue 5.40e-217
type IV pilin; K02653 type IV pilus assembly protein PilC id=5227504 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 406.0
  • Bit_score: 433
  • Evalue 1.80e-118
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 406.0
  • Bit_score: 261
  • Evalue 3.50e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_OD1_41_8 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGCTTTTTTCATACAGCGCAAAATCAAAAACAGGAGAAGTTTCAGAAGGCACATTAGAAGCTTCAGATCGTCTTTCGCTAGCTCGCGATTTGAGGTCCCGCGGGTATATTCCCATTTCAATCTCTGAAAAAAGCGGAAATTTTATTGATAAGTTTTCCATATTTGCCGGTCTTTTTTCAAAAATAAGCGTCGCCGAACAGATTATTTTCACAAAAAATTTAAGCGGGATGATTCGGGCCGGCCTTTCGCTTTATCGGGCGCTCTCAGTTCTGAAAAAGCAGACAAAAAATCCCAAGCTCAATAAAATTTTAACATCTCTTTCCGCGGATATAAATTCCGGTGAGACTTTTTCCTCCGCGCTTTTAAAATTTCCCGAAGTTTTTTCAAAACTTTTTATATCAATGGTCCGCGCCGGCGAAGAATCCGGCAATCTCGCCGGCGCGCTTTCCGACATCGGGATGAATTTAGAGAAGTCAAACTCCTTAACCAAAAAAATACGAGGGGCGCTCATCTATCCAGGAGTTATTATGTCAGCAATGGTTGTAATCGGCGTTTTAATGTTTGCTTTCGTGGTCCCGACGCTGGCGAACACTTTTAAAGAACTTGGAGTAAAATTGCCGCTTTCCACCCAGATTCTCGTCTTTTTTGGAAATTTTTTCTCAAATAACCTGATACTGACTTTTGTAATTATTCTCAGCGCGGCATTTGGCCTGTATCTGATTTTCCGCGCCAAATTTATGGCAAAATACATTGATTTTGTCATGATGAAGATTCCGGTTATTGGCAATTTAACGAGAGAATTAAACACTGCCCGCACCGCCCGCACCATGTCTTCGCTTCTGCTTTCCGGAGTTTCCATAACGCGGGCGGTGGAAATTACCGAAGACGTGGTGCAAAATATTTACTATAAAAAAATTTTGAATGAAGCCAAAATAGCCGTAGAGAAGGGGGCTCCTTTTTCTCAAGCTTTTGAAGTAAATAATAAATTTTATCCCGTAATGATGTCGGAAATGATTCAAGTCGGGGAAGAAACCGGAAAATTATCGGATATGCTGCTCCAGATTGCCTTGTTTTATGAAGAAGAAATTGAAAACAAGACAAAAAATCTTTCCACGATTATTGAACCCATATTAATGATTATCATCGGCGCCGGGGTCGGGTTCTTCGCTATTTCAATGATTTCGCCGCTTTATTCAATATTGGGCAGCATAGAATAA
PROTEIN sequence
Length: 406
MLFSYSAKSKTGEVSEGTLEASDRLSLARDLRSRGYIPISISEKSGNFIDKFSIFAGLFSKISVAEQIIFTKNLSGMIRAGLSLYRALSVLKKQTKNPKLNKILTSLSADINSGETFSSALLKFPEVFSKLFISMVRAGEESGNLAGALSDIGMNLEKSNSLTKKIRGALIYPGVIMSAMVVIGVLMFAFVVPTLANTFKELGVKLPLSTQILVFFGNFFSNNLILTFVIILSAAFGLYLIFRAKFMAKYIDFVMMKIPVIGNLTRELNTARTARTMSSLLLSGVSITRAVEITEDVVQNIYYKKILNEAKIAVEKGAPFSQAFEVNNKFYPVMMSEMIQVGEETGKLSDMLLQIALFYEEEIENKTKNLSTIIEPILMIIIGAGVGFFAISMISPLYSILGSIE*