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RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_1
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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1..3597
DNA (3597bp) protein (1199aa)
Cell wall surface anchor family protein n=1 Tax=Streptococcus sanguinis SK1058 RepID=F2CMG6_STRSA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
cell wall/surface repeat-containing protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_2
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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3700..5457
DNA (1758bp) protein (586aa)
Type II secretion system protein E Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
id=5227503 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
secretion system protein E
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_3
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

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5465..6682
DNA (1218bp) protein (406aa)
Type II secretion system protein {ECO:0000313|EMBL:KKS23143.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
type IV pilin; K02653 type IV pilus assembly protein PilC id=5227504 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_4
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

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6687..7145
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q148_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS04990.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_5
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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7211..7741
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX66_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_6
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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7749..8252
DNA (504bp) protein (168aa)
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
transmembrane_regions id=5227507 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_7
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

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8268..10019
DNA (1752bp) protein (584aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS04993.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
transmembrane_regions id=5227508 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_8
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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10047..10847
DNA (801bp) protein (267aa)
Triose-phosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=5803118 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Triose-phosphate isomerase (EC:5.3.1.1)
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_9
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

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10844..12073
DNA (1230bp) protein (410aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] id=15190951 bin=GWC1_OP11_49_16_COMPLETE species=Thermotoga sp. genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000313|EMBL:KKS24638.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_10
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

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comp(12063..12467)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003727C46
Histidine triad (HIT) protein {ECO:0000313|EMBL:KKS04996.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
histidine triad (HIT) protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_11
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12581..14233
DNA (1653bp) protein (551aa)
Single-stranded-DNA-specific exonuclease n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX71_9BACT
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:KKS04997.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
single-stranded-DNA-specific exonuclease RecJ
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_12
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14236..14712
DNA (477bp) protein (159aa)
rnhA; ribonuclease HI (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
rnhA; ribonuclease HI (EC:3.1.26.4)
Ribonuclease H n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYF4_9BACT
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_13
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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14713..16188
DNA (1476bp) protein (492aa)
DNA internalization-related competence protein ComEC/Rec2 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC id=5803109 bin=OD1_GWC2_34_28 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA internalization-related competence protein ComEC/Rec2
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_14
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(16299..16892)
DNA (594bp) protein (198aa)
manganese/iron superoxide dismutase-like protein; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
Superoxide dismutase, iron/manganese-containing n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZU5_9BACT
manganese/iron superoxide dismutase-like protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_15
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16909..17775
DNA (867bp) protein (289aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
DNA internalization-like competence protein ComEC/Rec2; K02238 competence protein ComEC id=5803006 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_16
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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17757..19001
DNA (1245bp) protein (415aa)
glyA; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase (EC:2.1.2.1) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
serine hydroxymethyltransferase n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00037B7058
serine hydroxymethyltransferase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_17
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19002..19871
DNA (870bp) protein (290aa)
aldo/keto reductase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
Putative uncharacterized protein id=5227152 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
aldo/keto reductase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_18
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19879..20301
DNA (423bp) protein (141aa)
NUDIX hydrolase n=1 Tax=uncultured bacterium RepID=K1Y7I7_9BACT
MutT/nudix family protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
MutT/nudix family protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_19
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

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20307..20780
DNA (474bp) protein (158aa)
NUDIX hydrolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQS2_9BACT
NUDIX hydrolase {ECO:0000313|EMBL:KKS24648.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
NUDIX family hydrolase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_20
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

20784..21332
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FF61_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_21
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

21357..22073
DNA (717bp) protein (239aa)
Thymidylate kinase {ECO:0000313|EMBL:KKS05007.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
Thymidylate kinase id=5227250 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_22
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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22070..22555
DNA (486bp) protein (162aa)
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] id=15189463 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
NUDIX hydrolase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
NUDIX hydrolase
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_23
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

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22552..22977
DNA (426bp) protein (142aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] id=130376 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut {ECO:0000313|EMBL:KKS24652.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
RIFCSPHIGHO2_01_FULL_OD1_41_91_rifcsphigho2_01_scaffold_6544_24
GWA2_OD1_41_25_partial, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

22981..24693
DNA (1713bp) protein (571aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine-tRNA ligase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWD9_9BACT
Arginine-tRNA ligase {ECO:0000313|EMBL:KKS05010.1}; TaxID=1618736 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_41_25.;"
Displaying 24 items

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