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RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(150..272)
DNA (123bp) protein (41aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

311..1141
DNA (831bp) protein (277aa)
DsbA family oxidoreductase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
DSBA oxidoreductase id=5803654 bin=OD1_GWC2_34_28 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
protein-disulfide isomerase
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1247..4192)
DNA (2946bp) protein (982aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] id=15190420 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
UvrD/REP helicase
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4312..5067
DNA (756bp) protein (252aa)
hypothetical protein; K07491 putative transposase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Putative uncharacterized protein id=3634404 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5188..6414)
DNA (1227bp) protein (409aa)
RpoD subfamily RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor id=5803390 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RpoD subfamily RNA polymerase sigma-70 factor
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6441..6602
DNA (162bp) protein (54aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6599..8332)
DNA (1734bp) protein (578aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
dnaG; DNA primase; K02316 DNA primase [EC:2.7.7.-] id=5803389 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA primase
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8507..12187)
DNA (3681bp) protein (1227aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=5803388 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA-directed RNA polymerase subunit beta'
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(12194..15400)
DNA (3207bp) protein (1069aa)
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
DNA-directed RNA polymerase subunit beta n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZL8_9BACT
DNA-directed RNA polymerase subunit beta
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

15733..16428
DNA (696bp) protein (232aa)
Haloacid dehalogenase, IB family protein n=1 Tax=uncultured bacterium RepID=K2EYQ6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(16648..17334)
DNA (687bp) protein (229aa)
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
trmD; tRNA (guanine-n(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=5803366 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
trmD; tRNA (guanine-N(1)-)-methyltransferase
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17605..17913)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVH6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(18234..18626)
DNA (393bp) protein (131aa)
Ribosomal protein S16 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZL5_9BACT
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpsP; 30S ribosomal protein S16
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(18830..20839)
DNA (2010bp) protein (670aa)
RNAse R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RNAse R (EC:3.1.-.-)
Ribonuclease R id=3012811 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21147..23411)
DNA (2265bp) protein (755aa)
smc; chromosome partition protein Smc Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Smc; chromosome segregation ATPase; K03529 chromosome segregation protein id=5803429 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
smc; chromosome partition protein Smc
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_3872_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(23433..24125)
DNA (693bp) protein (231aa)
putative ribonuclease III (EC:3.1.26.3) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] id=5803446 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
Displaying 16 items

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