ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2..1339)
DNA (1338bp) protein (446aa)
putative penicillin-binding protein; K05515 penicillin-binding protein 2 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
penicillin-binding protein 2; K05515 penicillin-binding protein 2 id=5803382 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Penicillin-binding protein 2 (PBP-2)
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1345..1581)
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1801..2085)
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2075..2881)
DNA (807bp) protein (269aa)
Rod shape-determining protein MreC Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Rod shape-determining protein MreC id=5803380 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2859..3914)
DNA (1056bp) protein (352aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins id=5803379 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rod shape-determining protein MreB
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(4277..5527)
DNA (1251bp) protein (417aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Proline-tRNA ligase n=1 Tax=uncultured bacterium RepID=K2EZK3_9BACT
Prolyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5600..5854
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5838..6905)
DNA (1068bp) protein (356aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=5227116 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
membrane-associated zinc metalloprotease
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7173..7721)
DNA (549bp) protein (183aa)
Ribosome recycling factor Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Frr; K02838 ribosome recycling factor id=5803375 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribosome recycling factor
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7785..7934
DNA (150bp) protein (50aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7944..8621)
DNA (678bp) protein (226aa)
DNA polymerase III delta prime subunit; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
holB; DNA polymerase III, delta prime subunit (EC:2.7.7.7)
DNA polymerase III, delta' subunit id=1903434 bin=GWD2_Nitrospirae-related_57_8 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8723..9736)
DNA (1014bp) protein (338aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=5227119 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rod shape-determining protein MreB
RIFCSPHIGHO2_01_FULL_OD1_43_120_rifcsphigho2_01_scaffold_24314_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9925..10560)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B3AA19
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Displaying 13 items

View Taxonomy