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RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_1
GWA1_OD1_43_15, Giovannonibacteria, Parcubacteria, Bacteria

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32..1861
DNA (1830bp) protein (610aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH Tax=GWA1_OD1_43_15
ATP-dependent zinc metalloprotease FtsH id=3736471 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_2

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comp(2230..2784)
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS96635.1}; TaxID=1618651 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_43_13.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14424115 bin=bin11_novelCP species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=bin11_novelCP organism_group=Unknown_CP
ECF subfamily RNA polymerase sigma-24 subunit
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_3

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2832..4388
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000366E5FB
Uncharacterized protein {ECO:0000313|EMBL:KKT63640.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_4

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4435..4644
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT63641.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_5

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4756..5280
DNA (525bp) protein (175aa)
Repressor in the phenylacetic acid catabolism {ECO:0000313|EMBL:KKT63642.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
transmembrane_regions 12..31 id=84758 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
PaaX family transcriptional regulator
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_6
GWC2_OD1_43_8, Giovannonibacteria, Parcubacteria, Bacteria

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comp(5342..7471)
DNA (2130bp) protein (710aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] id=5803096 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KKT20832.1}; TaxID=1618656 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWC2_43_8.;"
ATP-dependent DNA helicase RecG
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_7

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7533..7943
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT63644.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_8

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comp(8057..8773)
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT63645.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_9

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comp(8816..9181)
DNA (366bp) protein (122aa)
Ribonuclease VapC n=1 Tax=Arthrospira sp. PCC 8005 RepID=H1WIP5_9CYAN
Nucleotide binding protein {ECO:0000313|EMBL:KKT63646.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_10
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(9204..9383)
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_11

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comp(9405..9890)
DNA (486bp) protein (162aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT63647.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
id=2607524 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_12

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comp(9927..10202)
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT63648.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
RIFCSPHIGHO2_01_FULL_OD1_43_140_rifcsphigho2_01_scaffold_23159_13

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comp(10209..10457)
DNA (249bp) protein (83aa)
Recombinase n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LVL3_HIPMA
Recombinase {ECO:0000313|EMBL:KKT63649.1}; TaxID=1618648 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26.;"
recombinase
Displaying 13 items

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