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RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586

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Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_1
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1664..2347)
DNA (684bp) protein (228aa)
small-conductance mechanosensitive ion channel Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
small-conductance mechanosensitive ion channel id=5803314 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
small-conductance mechanosensitive ion channel
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_2
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2447..3076)
DNA (630bp) protein (210aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
seg id=5803313 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_3
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3256..3642)
DNA (387bp) protein (129aa)
LSU ribosomal protein L12P Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=5803312 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplL; 50S ribosomal subunit protein L7/L12
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_4
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(3768..4259)
DNA (492bp) protein (164aa)
rplJ; 50S ribosomal protein L10 Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
50S ribosomal protein L10 id=5226868 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplJ; 50S ribosomal protein L10
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_5
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(4427..7270)
DNA (2844bp) protein (948aa)
acetyltransferases and hydrolases with the alpha/beta hydrolase fold Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
acetyltransferases and hydrolases with the alpha/beta hydrolase fold id=84115 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_6
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7429..7542)
DNA (114bp) protein (38aa)
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_7
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7650..8783)
DNA (1134bp) protein (378aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI0003792B79
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_8
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8794..9321)
DNA (528bp) protein (176aa)
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_9
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9542..11482)
DNA (1941bp) protein (647aa)
PREDICTED: uncharacterized protein LOC100937645, partial n=1 Tax=Pongo abelii RepID=UPI000273DD2E
PREDICTED: uncharacterized protein LOC100937645, partial Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_10
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11864..12652)
DNA (789bp) protein (263aa)
seg Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
seg id=5803304 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_11
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

12840..15161
DNA (2322bp) protein (774aa)
putative cell division FtsK/SpoIIIE Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
ftsK; cell division protein ftsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family id=5803303 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division FtsK/SpoIIIE
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_12
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

15203..15559
DNA (357bp) protein (119aa)
Putative transcriptional regulator n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPY7_9FIRM id=84638 bin=ACD56 species=Mitsuokella multacida genus=Mitsuokella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
Putative transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_13
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


15650..16768
DNA (1119bp) protein (373aa)
recA; recombinase A Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
id=5227534 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
recA; recombinase A
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_14
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16835..17110
DNA (276bp) protein (92aa)
Phage-related protein n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GQA3_CLOLD
phage-like protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
phage-like protein
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_15
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17379..17657)
DNA (279bp) protein (93aa)
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_16
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

17917..18159
DNA (243bp) protein (81aa)
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_17
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

18269..18781
DNA (513bp) protein (171aa)
translation elongation factor P Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
efp; elongation factor P; K02356 elongation factor P id=5803300 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
efp; elongation factor P
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_18
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(18872..19249)
DNA (378bp) protein (126aa)
Ribosomal protein S23 n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A2A3_MELRP
30S ribosomal protein S23 Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
30S ribosomal protein S23
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_19
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(19297..19500)
DNA (204bp) protein (68aa)
30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
30S ribosomal protein S18p; K02963 small subunit ribosomal protein S18 id=5227230 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S18
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_20
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(19521..19991)
DNA (471bp) protein (157aa)
single-strand-binding protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
single-strand binding protein; K03111 single-strand DNA-binding protein id=5803295 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
single-strand-binding protein
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_21
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(20067..20633)
DNA (567bp) protein (189aa)
Ribosomal protein S6 Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
Ribosomal protein S6 id=5803294 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_22
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(20829..21356)
DNA (528bp) protein (176aa)
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_23
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21362..22036)
DNA (675bp) protein (225aa)
seg Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
seg id=5803073 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_24
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(22065..22751)
DNA (687bp) protein (229aa)
seg Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
seg id=5803074 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_25
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(22754..23338)
DNA (585bp) protein (195aa)
transmembrane_regions Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
transmembrane_regions id=5227291 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_26
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(23397..24227)
DNA (831bp) protein (277aa)
tatD; Mg-dependent DNase; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWH2_9BACT
tatD; Mg-dependent DNase
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_27
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(24258..25700)
DNA (1443bp) protein (481aa)
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
Methionyl-tRNA synthetase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZ48_9BACT
methionyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_28
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(25826..26920)
DNA (1095bp) protein (365aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
hypothetical protein id=5803290 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_29
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(26930..28213)
DNA (1284bp) protein (428aa)
peptidase M16 domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
peptidase M16 domain-containing protein id=5803288 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M16 domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_586_30
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(28317..29720)
DNA (1404bp) protein (468aa)
glyQS; Glycine--tRNA ligase (EC:6.1.1.14) Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
glyQS; Glycine--tRNA ligase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PXJ6_9BACT
Displaying items 1-30 of 64 in total

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