ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_44514

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_44514_1
unknown

Not on your lists

comp(1..84)
DNA (84bp) protein (28aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH id=3736471 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
ATP-dependent zinc metalloprotease FtsH id=3736471 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_44514_2
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

115..1974
DNA (1860bp) protein (620aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_44514_3
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2025..2267
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037246AE
transcriptional regulator/antitoxin, MazE Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
transcriptional regulator/antitoxin, MazE
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_44514_4
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

2261..2605
DNA (345bp) protein (115aa)
transcriptional modulator of MazE/toxin, MazF; K07171 mRNA interferase [EC:3.1.-.-] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
PemK-like protein id=2302659 bin=GWB2_Ignavibacteria_35_12 species=Paenibacillus vortex genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
transcriptional modulator of MazE/toxin, MazF
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_44514_5
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2689..3234
DNA (546bp) protein (182aa)
glutathionylspermidine synthase (EC:6.3.1.8) id=7201154 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
shikimate kinase
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_44514_6
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3236..4807
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000366E5FB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
membrane protein
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_44514_7
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(4878..5270)
DNA (393bp) protein (131aa)
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_44514_8
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(5428..6000)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003615D0F
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110_rifcsphigho2_01_scaffold_44514_9
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(6056..8137)
DNA (2082bp) protein (694aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] id=5803096 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ATP-dependent DNA helicase RecG
Displaying 9 items

View Taxonomy