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RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_1
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

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comp(118..825)
DNA (708bp) protein (236aa)
Amidophosphoribosyltransferase-like protein n=1 Tax=uncultured bacterium RepID=K2F1Q3_9BACT
comF family protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
competence protein ComF
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_2
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

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861..1916
DNA (1056bp) protein (352aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Putative type IV pilus assembly protein PilM id=1968435 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
pilus assembly protein PilM
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_3
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

1917..2708
DNA (792bp) protein (264aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_4
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

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2782..3345
DNA (564bp) protein (188aa)
id=1968429 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
id=1968429 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_5
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

3329..3859
DNA (531bp) protein (177aa)
id=1968428 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
id=1968428 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_6
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

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3856..4125
DNA (270bp) protein (90aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_7
GWB1_OD1_45_11_partial, Yanofskybacteria, Parcubacteria, Bacteria

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4133..5890
DNA (1758bp) protein (586aa)
Type IV-A pilus assembly ATPase PilB {ECO:0000313|EMBL:KKT90020.1}; TaxID=1619026 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWB1_45_11.;"
Type IV-A pilus assembly ATPase PilB id=1968424 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
secretion system protein E
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_8
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

5893..6951
DNA (1059bp) protein (353aa)
pilT; twitching motility protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
twitching motility protein id=1968409 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
pilT; twitching motility protein
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_9
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

6951..8162
DNA (1212bp) protein (404aa)
Tfp pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Type IV pilus inner membrane protein PilC id=1968408 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tfp pilus biogenesis protein PilC
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_10
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

8218..8790
DNA (573bp) protein (191aa)
putative General secretion pathway protein GspG Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Putative uncharacterized protein id=1968407 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_11
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

8847..9584
DNA (738bp) protein (246aa)
type 4 prepilin peptidase 1 (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
type 4 prepilin peptidase 1 (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme PilD id=1968406 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_12
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

9553..10125
DNA (573bp) protein (191aa)
id=1968404 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
id=1968404 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_13
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

10116..10586
DNA (471bp) protein (157aa)
id=1968403 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
id=1968403 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_14
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

10573..11076
DNA (504bp) protein (168aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT28488.1}; TaxID=1619024 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
Type IV pilus assembly protein PilW id=1968402 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_15
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

11066..11425
DNA (360bp) protein (120aa)
id=1968401 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
id=1968401 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_14253_16
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

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11470..11619
DNA (150bp) protein (50aa)
NAD-dependent DNA ligase (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
DNA ligase n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IDV7_ALIAT
ligA; NAD-dependent DNA ligase
Displaying 16 items

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