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RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_1
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

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2..79
DNA (78bp) protein (26aa)
cth:Cthe_0720 aminotransferase, class V; K04487 cysteine desulfurase [EC:2.8.1.7] id=3152162 bin=GWC1_OD1_38_17 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cysteine desulfurase NifS; K04487 cysteine desulfurase [EC:2.8.1.7]
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_2
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(311..1486)
DNA (1176bp) protein (392aa)
Cysteine desulfurase {ECO:0000313|EMBL:KKT50334.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
cysteine desulfurase NifS
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_3
GWA2_OD1_rel_E2_38_254_42_10, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(1471..2757)
DNA (1287bp) protein (429aa)
Trigger factor {ECO:0000313|EMBL:KKS25151.1}; TaxID=1619004 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA2_42_10.;"
Trigger factor id=1968283 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
trigger factor
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_4
GWA2_OD1_rel_E2_38_254_42_10, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(2738..3979)
DNA (1242bp) protein (414aa)
Transcription termination factor NusA {ECO:0000313|EMBL:KKS25150.1}; TaxID=1619004 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA2_42_10.;"
NusA antitermination factor id=1968286 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
transcription termination factor NusA
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_5
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(4082..4756)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXY0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKT50331.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_6
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(4809..5453)
DNA (645bp) protein (215aa)
methylase Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
methylase
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_7
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

5551..7215
DNA (1665bp) protein (555aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50329.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
Putative type II secretion system protein E id=4731902 bin=GWC2_OD1_43_27 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
type IV-A pilus assembly ATPase PilB
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_8
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

7448..8464
DNA (1017bp) protein (339aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000313|EMBL:KKT50328.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.
Holliday junction ATP-dependent DNA helicase RuvB id=1968297 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Holliday junction DNA helicase RuvB
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_9
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

8541..9014
DNA (474bp) protein (158aa)
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
crossover junction endodeoxyribonuclease RuvC Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Crossover junction endodeoxyribonuclease RuvC id=1968306 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_10
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

9095..9259
DNA (165bp) protein (55aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50326.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_11
GWA2_OD1_rel_E2_38_254_42_10, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(9290..10486)
DNA (1197bp) protein (399aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00035E536E
Tyrosine-tRNA ligase {ECO:0000313|EMBL:KKS25143.1}; TaxID=1619004 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA2_42_10.;"
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_12
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

10650..12725
DNA (2076bp) protein (692aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:KKT50324.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
Penicillin-binding protein, 1A family id=1968315 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_13
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(12718..12978)
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50323.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_14
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(12978..14069)
DNA (1092bp) protein (364aa)
Polymerase III, beta subunit protein {ECO:0000313|EMBL:KKT50322.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
DNA polymerase III subunit beta id=1968320 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
DNA polymerase III, beta subunit
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_15
GWA2_OD1_rel_E2_38_254_42_10, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(14295..15668)
DNA (1374bp) protein (458aa)
Chromosomal replication initiator protein DnaA {ECO:0000313|EMBL:KKS25139.1}; TaxID=1619004 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA2_42_10.;"
Chromosomal replication initiator protein DnaA id=1968323 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
chromosomal replication initiator protein DnaA
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_16
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

16066..16413
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50320.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_17
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

16410..16637
DNA (228bp) protein (76aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FLJ1_9AQUI
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_18
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

16640..17347
DNA (708bp) protein (236aa)
Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family) {ECO:0000313|EMBL:KKT50318.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) ba
60 kDa inner membrane insertion protein id=1968335 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
oxaAA; Sec-independent factor for membrane protein insertion (YidC/SpoIIIJ family)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_19
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

17328..17798
DNA (471bp) protein (157aa)
Single-stranded nucleic acid binding R3H domain protein {ECO:0000313|EMBL:KKT50317.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_
R3H domain protein id=1968368 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
single-stranded nucleic acid binding R3H domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_20
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(17792..18844)
DNA (1053bp) protein (351aa)
id=1968370 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
id=1968370 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_21
GWB1_OD1_45_11_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(18846..19496)
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT90154.1}; TaxID=1619026 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWB1_45_11.;"
id=1968371 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_22
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(19501..21252)
DNA (1752bp) protein (584aa)
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
Type IV secretory pathway VirB4 components-like protein id=1968373 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Type IV secretory pathway VirB4 components-like protein
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_23
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(21239..21874)
DNA (636bp) protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50313.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
Putative uncharacterized protein id=1968374 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_24
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(21874..22170)
DNA (297bp) protein (99aa)
id=1968377 Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
id=1968377 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_44_110b_rifcsphigho2_01_scaffold_23165_25
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(22167..23771)
DNA (1605bp) protein (535aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT50311.1}; Flags: Fragment;; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
Displaying 25 items

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