ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_1
unknown

Not on your lists

comp(3..140)
DNA (138bp) protein (46aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_2
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

203..370
DNA (168bp) protein (56aa)
helix-turn-helix domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Helix-turn-helix domain protein id=4790080 bin=GWC2_OD1_43_27 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
helix-turn-helix domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_3
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

409..1254
DNA (846bp) protein (282aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_4
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

1927..2103
DNA (177bp) protein (59aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_5
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(2462..3157)
DNA (696bp) protein (232aa)
Resolvase helix-turn-helix domain protein n=1 Tax=Micromonospora sp. L5 RepID=D3CGD6_9ACTO id=133597 bin=ACD81 species=Micromonospora sp. L5 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Resolvase helix-turn-helix domain protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_6
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

3211..3342
DNA (132bp) protein (44aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_7
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(3289..3459)
DNA (171bp) protein (57aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_8
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(3469..3930)
DNA (462bp) protein (154aa)
Protein containing Heat shock protein Hsp20 domain n=1 Tax=sediment metagenome PF62_9ZZZZ">RepID=D9PF62_9ZZZZ
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Small heat shock protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_9
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(3953..4678)
DNA (726bp) protein (242aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Putative uncharacterized protein id=5226977 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_10
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(4666..6726)
DNA (2061bp) protein (687aa)
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
valyl-tRNA synthetase (EC:6.1.1.9)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000369942C
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_11
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(6792..7820)
DNA (1029bp) protein (343aa)
DNA-binding/iron metalloprotein/AP endonuclease; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=uncultured bacterium RepID=K1YE18_9BACT
DNA-binding/iron metalloprotein/AP endonuclease
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_12
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(7801..8145)
DNA (345bp) protein (115aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_56189_13
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

8195..8401
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Displaying 13 items

View Taxonomy