ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_108304

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_108304_1
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

1..609
DNA (609bp) protein (203aa)
ugd; UDP-glucose 6-dehydrogenase (ugd) (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
UDP-glucose/GDP-mannose dehydrogenase dimerization id=4077955 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_108304_2
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

611..1579
DNA (969bp) protein (323aa)
wcaG; nucleoside-diphosphate-sugar epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
UDP-glucose 4-epimerase id=4077949 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
wcaG; nucleoside-diphosphate-sugar epimerase
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_108304_3
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

1911..3494
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003788A68
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_108304_4
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

3498..4448
DNA (951bp) protein (317aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Geobacter sp. M18 RepID=C6MV99_9DELT id=2810 bin=ACD11 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_108304_5
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(4440..5150)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000375F917
DsbA family oxidoreductase Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Sodium/proton antiporter
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_108304_6
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

5180..5575
DNA (396bp) protein (132aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
hypothetical protein id=4532135 bin=GWA2_OP3_52_12 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Displaying 6 items

View Taxonomy