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RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_1
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(3..944)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037BB5B2
peptidase M16 domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
peptidase M16 protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_2
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(1023..1277)
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_3
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(1306..2583)
DNA (1278bp) protein (426aa)
glycyl-tRNA synthetase; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Glycine--tRNA ligase id=2824158 bin=GWC1_OD1_38_17 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
glycyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_4
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(2622..4526)
DNA (1905bp) protein (635aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
transmembrane_regions id=5803285 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_5
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(4544..5092)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003729882
recO; DNA repair protein RecO Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
recO; DNA repair protein RecO
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_6
unknown

Not on your lists

comp(5172..5285)
DNA (114bp) protein (38aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_7
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(5336..8704)
DNA (3369bp) protein (1123aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003827A64
isoleucyl-tRNA synthetase
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_8
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

8798..9055
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_9
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(9091..9480)
DNA (390bp) protein (130aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_10
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


comp(9545..11119)
DNA (1575bp) protein (525aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
argS; Arginine--tRNA ligase (EC:6.1.1.19) id=15188752 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
arginyl-tRNA synthetase (EC:6.1.1.19)
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_11
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

11213..11659
DNA (447bp) protein (149aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_12
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(11746..12078)
DNA (333bp) protein (111aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_13
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

12156..12608
DNA (453bp) protein (151aa)
smpB; ssrA RNA (tmRNA)-binding protein; K03664 SsrA-binding protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
SsrA-binding protein; K03664 SsrA-binding protein id=5803104 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
smpB; ssrA RNA (tmRNA)-binding protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_14
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

12612..13640
DNA (1029bp) protein (343aa)
D-alanine-D-alanine ligase Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
D-alanine-D-alanine ligase
D-alanine-D-alanine ligase-like protein id=2423735 bin=GWA2_Ignavibacteriae_54_16_partial species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_15
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

14127..14783
DNA (657bp) protein (219aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
hypothetical protein; K07002 id=8208 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_16
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(14991..15809)
DNA (819bp) protein (273aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
hypothetical protein id=5095179 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_17
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(15930..16568)
DNA (639bp) protein (213aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_18
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(16652..18025)
DNA (1374bp) protein (458aa)
Tyrosine phenol-lyase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A0K1_MELRP
tyrosine phenol-lyase Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
tyrosine phenol-lyase
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_19
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

18148..18615
DNA (468bp) protein (156aa)
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
translation initiation factor IF-3; K02520 translation initiation factor IF-3 id=5803010 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
translation initiation factor IF-3
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_6328_20
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists


18623..18817
DNA (195bp) protein (65aa)
Ribosomal protein L35 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Ribosomal protein L35 id=5227325 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Displaying 20 items

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