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RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_1
R_OD1_45_48, Parcubacteria, Bacteria

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comp(1..564)
DNA (564bp) protein (188aa)
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
50S ribosomal protein L25 id=3506654 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_2
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(586..1563)
DNA (978bp) protein (326aa)
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; K00015 glyoxylate reductase [EC:1.1.1.26] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein id=3506657 bin=GWC1_OD1_38_17 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_3
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(1575..2444)
DNA (870bp) protein (290aa)
Tagatose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Tagatose-bisphosphate aldolase id=4790072 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Tagatose-bisphosphate aldolase
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_4
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

2490..3482
DNA (993bp) protein (331aa)
putative Ribokinase (EC:2.7.1.15) Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
carbohydrate kinase PfkB; K00852 ribokinase [EC:2.7.1.15] id=5803344 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative Ribokinase (EC:2.7.1.15)
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_5
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(4409..5434)
DNA (1026bp) protein (342aa)
transketolase ; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Transketolase central region id=3423631 bin=GWA1_ZB2_49_26 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
transketolase
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_6
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(5451..7571)
DNA (2121bp) protein (707aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
hypothetical protein id=5803305 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_7
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(7692..8570)
DNA (879bp) protein (293aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_8
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(8649..9296)
DNA (648bp) protein (216aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_9
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(9317..10204)
DNA (888bp) protein (296aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) id=15189839 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Transketolase protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_10
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(10229..10780)
DNA (552bp) protein (184aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_11
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(10777..11427)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036FE8E4
ribulose-phosphate 3-epimerase Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
ribulose-phosphate 3-epimerase
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_12
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(11396..11506)
DNA (111bp) protein (37aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_13
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(11497..11628)
DNA (132bp) protein (44aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_14
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(11625..12071)
DNA (447bp) protein (149aa)
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Isomerase B n=1 Tax=uncultured bacterium FPPP_13C3 RepID=S4WBA4_9BACT
ribose-5-phosphate isomerase B
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_15
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(12068..13081)
DNA (1014bp) protein (338aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase id=4800147 bin=GWC2_OD1_43_27 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_16
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(13089..14039)
DNA (951bp) protein (317aa)
ahpF; alkyl hydroperoxide reductase subunit F (EC:1.8.1.-); K03387 alkyl hydroperoxide reductase subunit F [EC:1.6.4.-] Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
ahpF; alkyl hydroperoxide reductase subunit F (EC:1.8.1.-)
Alkyl hydroperoxide reductase, F subunit id=4800149 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_17
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(14064..14759)
DNA (696bp) protein (232aa)
DSBA oxidoreductase Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
DsbA oxidoreductase id=4800153 bin=GWC2_OD1_43_27 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
DSBA oxidoreductase
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_18
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(14801..15292)
DNA (492bp) protein (164aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_19
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(15308..16081)
DNA (774bp) protein (258aa)
Large exoprotein involved in heme utilization or adhesion n=1 Tax=Enterobacter sp. SST3 RepID=K4YJG7_9ENTR
pilV2; Type IV B pilus protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Type IV B pilus protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_20
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(16071..16568)
DNA (498bp) protein (166aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_21
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(16572..17351)
DNA (780bp) protein (260aa)
Ig family protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Ig family protein id=15187753 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_22
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(17368..17793)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI000366DAA9
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_23
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(17815..19077)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000362CBEE
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_24
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(19099..22704)
DNA (3606bp) protein (1202aa)
MUC22; mucin 22 Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
mxa:MXAN_0889 RCC1 repeat-containing protein id=9352 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
psrP; Large surface exposed glycoprotein PsrP
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_25
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(22740..23888)
DNA (1149bp) protein (383aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
hypothetical protein id=5803061 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_26
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(23852..25033)
DNA (1182bp) protein (394aa)
NAD(P)H-nitrite reductase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3L3_9FIRM
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_17696_27
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(25026..25346)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EZU0_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Displaying 27 items

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