ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_3

Organism: Candidatus Niyogibacteria bacterium RIFCSPHIGHO2_01_FULL_45_28

partial RP 38 / 55 BSCG 38 / 51 ASCG 9 / 38
Location: 1609..2166

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 355
  • Evalue 5.30e-95
transmembrane_regions id=5227303 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 28.5
  • Coverage: 186.0
  • Bit_score: 76
  • Evalue 2.60e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_45_48 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGCCGGAAATATCGTCATTTATTCCAAAAACGGAAGCAGTAAAGCAAATTTATTCAAGCAAAGGCTTGGGGTGGCTTATGGGTCTTTCTTCGGTTTTTTTCATACTCTCGCTCATGCTGTCTTTTGGATTGTTTTTTTACCGGGGTTTTCTTGAGACCGGGATCGCGAAGCTTTCCGATGATCTAAAAAAAGTCGAGAGCGAATTCGAGCCCTCTCTTATTTTAGAGCTTCAGGCAACCGCCAAATCTCTTGACTCGGTCAAGATTTCAATGAATAAGCACGTTGCCTTATCACAGCTTTTTGATTTTTTGAAGGCCAACACGATTTTTGACGCCAGCTTCAGTAATTTTTCTTACGACAAAAAGTCGGTGCAAATGTCGGGAACCGCCAAATCCTACGCCGCGCTTGCACAGCAGTCCCTTGTTTTTGAAAAAAGCCGTCTGATTAAAGATGTTTTATTTTCGAATTTTTCCCTGACTTCCGAAGGGTTTGTGAATTTCAGCGTAAAATTCACGCCCGAGGCCGAACTTATTTCGTATAAACCCGTTTCCGACTAA
PROTEIN sequence
Length: 186
MPEISSFIPKTEAVKQIYSSKGLGWLMGLSSVFFILSLMLSFGLFFYRGFLETGIAKLSDDLKKVESEFEPSLILELQATAKSLDSVKISMNKHVALSQLFDFLKANTIFDASFSNFSYDKKSVQMSGTAKSYAALAQQSLVFEKSRLIKDVLFSNFSLTSEGFVNFSVKFTPEAELISYKPVSD*