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RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_1
R_OD1_45_48, Parcubacteria, Bacteria

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comp(3..419)
DNA (417bp) protein (139aa)
Phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CMM0_9CLOT
competence protein F; K02242 competence protein ComFC Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
amidophosphoribosyltransferase
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_2
R_OD1_45_48, Parcubacteria, Bacteria

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471..1604
DNA (1134bp) protein (378aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=5803086 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type IV pilus assembly protein PilM
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_3
R_OD1_45_48, Parcubacteria, Bacteria

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1609..2166
DNA (558bp) protein (186aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
transmembrane_regions id=5227303 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_4
R_OD1_45_48, Parcubacteria, Bacteria

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2168..2671
DNA (504bp) protein (168aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_5
R_OD1_45_48, Parcubacteria, Bacteria

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2673..2972
DNA (300bp) protein (100aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_6
R_OD1_45_48, Parcubacteria, Bacteria

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2976..4685
DNA (1710bp) protein (570aa)
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_7
R_OD1_45_48, Parcubacteria, Bacteria

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4685..5128
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI0003740FFF
Type II secretion system protein G
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_8
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

5107..5517
DNA (411bp) protein (137aa)
Phosphate regulon transcriptional regulatory protein; K07657 two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Response regulator receiver domain protein id=5227299 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
phosphate regulon transcriptional regulatory protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_9
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

5514..6581
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000373007F
pilT; twitching motility protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
pilT; twitching motility protein
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_10
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

6584..7792
DNA (1209bp) protein (403aa)
type IV pilin; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=5803078 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type IV pilin
RIFCSPHIGHO2_01_FULL_OD1_45_28_rifcsphigho2_01_scaffold_46631_11
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

7896..8408
DNA (513bp) protein (171aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
Tfp pilus assembly protein PilE-like id=4731762 bin=GWC2_OD1_43_27 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Displaying 11 items

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