ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_23476

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_23476_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


43..309
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFI7_CLOAI id=95741 bin=ACD63 species=Candidatus Cloacimonas acidaminovorans genus=Candidatus Cloacimonas taxon_order=unknown taxon_class=unknown phylum=Cloacimonetes tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
30S ribosomal protein S15
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_23476_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

428..2623
DNA (2196bp) protein (732aa)
polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
tjr:TherJR_1385 polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=130981 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_23476_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(2918..4168)
DNA (1251bp) protein (417aa)
transcriptional regulator CdaR; K02647 carbohydrate diacid regulator Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Transcriptional regulator, CdaR id=1827553 bin=GWD2_CPR2_39_7 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
transcriptional regulator CdaR
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_23476_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4354..5571
DNA (1218bp) protein (406aa)
putative PAS/PAC sensor protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Signal transduction histidine kinase id=4115743 bin=GWF2_Bacteroidetes_41_31 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
putative PAS/PAC sensor protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_23476_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5585..5965
DNA (381bp) protein (127aa)
diguanylate cyclase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Response regulator receiver protein id=2343794 bin=GWD1_TM7_39_7 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
diguanylate cyclase domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_23476_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(5994..7175)
DNA (1182bp) protein (394aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
hypothetical protein id=5801790 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_23476_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(7178..7495)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SDF1_PEDSD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_23476_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(7482..7820)
DNA (339bp) protein (113aa)
Nucleotidyltransferase n=1 Tax=uncultured bacterium RepID=K1Z6M0_9BACT
DNA polymerase beta subunit Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
DNA polymerase beta subunit
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_23476_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

7927..8580
DNA (654bp) protein (218aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Displaying 9 items

View Taxonomy