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RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_1
unknown

Not on your lists

3..137
DNA (135bp) protein (45aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

191..778
DNA (588bp) protein (196aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=83893 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(982..1656)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035F18DE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(1692..2129)
DNA (438bp) protein (146aa)
isopentenyl-diphosphate delta-isomerase, type 2 (EC:5.3.3.2) id=130082 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(2131..2358)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SLP5_9EURY
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(2439..2996)
DNA (558bp) protein (186aa)
Type II secretory pathway pseudopilin PulG-like protein n=1 Tax=bacterium Ellin514 RepID=B9XLB6_9BACT id=87442 bin=ACD58 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
putative General secretion pathway protein GspG Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(2993..4375)
DNA (1383bp) protein (461aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00520 mercuric reductase [EC:1.16.1.1] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Mercuric reductase id=4176778 bin=GWC2_Pelobacter_58_13 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(4478..5710)
DNA (1233bp) protein (411aa)
Amylo-alpha-16-glucosidase n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L3Y8_9BACI
amylo-alpha-16-glucosidase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
amylo-alpha-16-glucosidase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(5662..6762)
DNA (1101bp) protein (367aa)
Glycosyl transferase, group 1 n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZGR2_NODSP id=17388 bin=ACD1 species=Nodularia spumigena genus=Nodularia taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
glycosyltransferase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
glycosyltransferase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(6909..7568)
DNA (660bp) protein (220aa)
General secretion pathway protein G n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BY10_DELAS
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
general secretion pathway protein G
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

7767..8048
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FZX3_9BACT
histone family protein DNA-binding protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
histone family protein DNA-binding protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


comp(8097..8255)
DNA (159bp) protein (53aa)
50S ribosomal protein L33 n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SPU8_9BACT
ribosomal protein L33 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
50S ribosomal protein L33
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(8277..8690)
DNA (414bp) protein (138aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(8847..9425)
DNA (579bp) protein (193aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(9443..10183)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036CF78F
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
multi-sensor signal transduction histidine kinase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(10208..11980)
DNA (1773bp) protein (591aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=uncultured bacterium RepID=K2EPY8_9BACT
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(12014..12307)
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(12304..12582)
DNA (279bp) protein (93aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=12889 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(12592..13002)
DNA (411bp) protein (137aa)
two component transcriptional regulator, winged helix family; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_cura
response regulator receiver modulated diguanylate cyclase/phosphodiesterase id=16426 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
two component transcriptional regulator, winged helix family
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13205..14023
DNA (819bp) protein (273aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Putative uncharacterized protein id=5050711 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_21

Not on your lists

comp(14008..15576)
DNA (1569bp) protein (523aa)
Recombinase {ECO:0000313|EMBL:KKT57125.1}; TaxID=1618652 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_44_23.;"
Recombinase id=3486293 bin=GWA1_ZB2_49_26 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
recombinase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_22
RHI_RIF_OD1_11_45_16, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

15641..15847
DNA (207bp) protein (69aa)
putative transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_11_45_16_curated
putative transcriptional regulator id=5803701 bin=OD1_GWC2_34_28 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
HTH-type transcriptional regulator
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_23
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

15850..17073
DNA (1224bp) protein (408aa)
Modification methylase EcoRI Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Modification methylase EcoRI id=4677417 bin=GWA2_Elusimicrobia_56_46 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Modification methylase EcoRI
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_24
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

17070..18239
DNA (1170bp) protein (390aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative uncharacterized protein id=4677415 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_10391_25
unknown

Not on your lists

18265..18375
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 25 items

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