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RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_1
R_SM2F11_48_13, SM2F11, Bacteria

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2..100
DNA (99bp) protein (33aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

230..871
DNA (642bp) protein (214aa)
hypothetical protein
transmembrane_regions Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transmembrane_regions id=5044142 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

879..2276
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037FDA40
Multicopper oxidase type 3 (fragment) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Multicopper oxidase type 3 (fragment)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

2286..3461
DNA (1176bp) protein (392aa)
cytochrome c biogenesis protein, transmembrane region Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
cytochrome c biogenesis transmembrane protein id=5044143 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cytochrome c biogenesis transmembrane protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

3558..3836
DNA (279bp) protein (93aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801812 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

3855..4481
DNA (627bp) protein (209aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=35953 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4483..6615
DNA (2133bp) protein (711aa)
copB; putative copper-exporting P-type ATPase B (EC:3.6.3.4) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hth:HTH_1811 cation transporting ATPase, E1-E2 family; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=8266275 bin=CD_OP8_4m species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
copB; putative copper-exporting P-type ATPase B (EC:3.6.3.4)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(6831..7106)
DNA (276bp) protein (92aa)
acylphosphatase (EC:3.6.1.7); K01512 acylphosphatase [EC:3.6.1.7] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Acylphosphatase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKK7_9CHLR
acylphosphatase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

7232..7672
DNA (441bp) protein (147aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

7834..8064
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037B560A
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8021..8260
DNA (240bp) protein (80aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8379..9392
DNA (1014bp) protein (338aa)
pilM; Type IV pilus assembly protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Putative type IV pilus assembly protein PilM id=1968435 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
pilus assembly protein PilM
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

9503..10078
DNA (576bp) protein (192aa)
id=4731794 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
id=4731794 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10075..10650
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036E46AD
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10647..11012
DNA (366bp) protein (122aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11013..12770
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZJE5_9BACT
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

12837..13142
DNA (306bp) protein (102aa)
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP Tax=RIFCSPLOWO2_02_FULL_SM2F11_
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP; K07658 two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP id=15190430 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13139..14221
DNA (1083bp) protein (361aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
csc:Csac_1061 twitching motility protein; K02669 twitching motility protein PilT id=84320 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
twitching motility protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

14300..15511
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A05CE
type II secretion system F domain-containing protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
type II secretion system F domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_8511_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15570..15791
DNA (222bp) protein (74aa)
hypothetical protein; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801442 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
Displaying 20 items

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