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RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

3..917
DNA (915bp) protein (305aa)
fibronectin type III domain-containing protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Fibronectin type III domain protein id=4838866 bin=GWC2_OD1_43_27 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
BNR repeat-containing glycosyl hydrolase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

944..2779
DNA (1836bp) protein (612aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
id=4838865 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

3017..3463
DNA (447bp) protein (149aa)
sat:SYN_00509 site-specific recombinase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
sat:SYN_00509 site-specific recombinase id=130565 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(3697..4221)
DNA (525bp) protein (175aa)
transposase n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI000369C197
transposase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transposase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

4255..4509
DNA (255bp) protein (85aa)
2-oxoacid:ferredoxin/flavodoxin oxidoreductase gamma subunit family protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] id=12555269 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ABJ88592.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Sol
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_6

Not on your lists

comp(4401..4688)
DNA (288bp) protein (96aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=mine drainage metagenome RepID=E6QIK7_9ZZZZ
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:CBI07073.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage m
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_7
R_SM2F11_49_9, SM2F11, Bacteria

Not on your lists

5138..6160
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3P9_PALPW
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_SM2F11_49_9_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_8
unknown

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6400..6957
DNA (558bp) protein (186aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_9
unknown

Not on your lists

7020..7439
DNA (420bp) protein (140aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_10
unknown

Not on your lists

7439..7573
DNA (135bp) protein (45aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7768..9225
DNA (1458bp) protein (486aa)
resolvase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A879C7
Resolvase family site-specific recombinase {ECO:0000313|EMBL:EHK57086.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source
putative resolvase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(9302..11002)
DNA (1701bp) protein (567aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
ttr:Tter_1614 peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=8795 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
peptidoglycan glycosyltransferase (EC:2.4.1.129)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(11013..11378)
DNA (366bp) protein (122aa)
coiled-coil 71..106 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
coiled-coil 71..106 id=8789 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(11379..12290)
DNA (912bp) protein (304aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RSMH_CARHZ
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(12292..12720)
DNA (429bp) protein (143aa)
MraZ protein; K03925 MraZ protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801412 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
MraZ protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(12732..12836)
DNA (105bp) protein (35aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(12879..14180)
DNA (1302bp) protein (434aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E669_GEOLS
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

14181..14951
DNA (771bp) protein (257aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(14936..15169)
DNA (234bp) protein (78aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=120740 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(15176..15355)
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_21
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(15360..15968)
DNA (609bp) protein (203aa)
LexA repressor n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUB4_9BACT
transcriptional repressor, LexA family Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transcriptional repressor, LexA family
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_22
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(16069..16185)
DNA (117bp) protein (39aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_23
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(16251..16496)
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_24
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(16498..17070)
DNA (573bp) protein (191aa)
Putative transcriptional regulator n=1 Tax=uncultured bacterium RepID=K2F249_9BACT
Putative transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_25
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

17141..19090
DNA (1950bp) protein (650aa)
seg 133..142 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
seg 133..142 id=96203 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_26
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(19111..19329)
DNA (219bp) protein (73aa)
hypothetical protein, partial n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000368F804
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_27
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(19326..19871)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z1B5_9BACT
Predicted metal-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Predicted metal-dependent hydrolase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_28
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(19868..20443)
DNA (576bp) protein (192aa)
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031442B4
hypothetical protein; K09793 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_29
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(20440..21063)
DNA (624bp) protein (208aa)
membrane protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031442B4
hypothetical protein; K09793 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_5586_30
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(21170..21352)
DNA (183bp) protein (61aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Displaying items 1-30 of 45 in total

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