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RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(107..1288)
DNA (1182bp) protein (394aa)
Chaperone protein DnaJ n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ANA6_THEM3
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
chaperone protein DnaJ
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_2
R_SM2F11_49_9, SM2F11, Bacteria

Not on your lists

comp(1301..3139)
DNA (1839bp) protein (613aa)
Chaperone protein DnaK n=1 Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=DNAK_UNCTG
chaperone protein DnaK ; K04043 molecular chaperone DnaK Tax=RIFCSPHIGHO2_01_FULL_SM2F11_49_9_curated
chaperone protein DnaK
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(3162..3617)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037D9D64
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
molecular chaperone GrpE
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(3614..4462)
DNA (849bp) protein (283aa)
Transcriptional regulator of heat shock gene n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2634 id=16557 bin=ACD1 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4742..4942
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4920..5444
DNA (525bp) protein (175aa)
putative General secretion pathway protein GspG Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transmembrane_regions 15..37 id=138527 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
fimbrial protein pilin
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(5450..6025)
DNA (576bp) protein (192aa)
sortase family protein
id=3239577 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
id=3239577 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(6111..6713)
DNA (603bp) protein (201aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(6865..9681)
DNA (2817bp) protein (939aa)
UvrABC system protein A n=1 Tax=uncultured bacterium RepID=K2BZI7_9BACT
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
uvrA; excinuclease ABC subunit A
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(9817..10956)
DNA (1140bp) protein (380aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801801 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10985..12874
DNA (1890bp) protein (630aa)
UvrABC system protein C n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYL4_PELTS
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
uvrC; excinuclease ABC subunit C
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13003..13221
DNA (219bp) protein (73aa)
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Preprotein translocase, SecG subunit id=1816853 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
secG; preprotein translocase, SecG subunit
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13280..14902
DNA (1623bp) protein (541aa)
putative ABC transporter substrate binding protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
extracellular solute-binding protein family 5; K02035 peptide/nickel transport system substrate-binding protein id=95825 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
putative ABC transporter substrate binding protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15256..17079
DNA (1824bp) protein (608aa)
toc:Toce_1227 RNA-metabolising metallo-beta-lactamase; K12574 ribonuclease J [EC:3.1.-.-] id=95824 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

17311..17814
DNA (504bp) protein (168aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

17887..18867
DNA (981bp) protein (327aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase id=4790119 bin=GWC2_OD1_43_27 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(18957..19205)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LS75_9FUSO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(19453..20832)
DNA (1380bp) protein (460aa)
glmM; phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] id=5048690 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glmM; phosphomannomutase
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_19
R_RIF_OD1_09_50_13, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(21031..21864)
DNA (834bp) protein (278aa)
dinD; DNA-damage-inducible protein, part of SOS response; K14623 DNA-damage-inducible protein D Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated
DNA-damage-inducible protein, part of SOS response id=1987435 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
dinD; DNA-damage-inducible protein, part of SOS response
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_20

Not on your lists

comp(21976..22137)
DNA (162bp) protein (54aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS89813.1}; TaxID=1618908 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_11b.;"
id=1899237 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_21
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22151..24754)
DNA (2604bp) protein (868aa)
type III restriction enzyme, res subunit; K01156 type III restriction enzyme [EC:3.1.21.5] Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
res; type III restriction-modification system restriction subunit (EC:3.1.21.5)
Type III restriction enzyme, res subunit n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J1V7_DESRM
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_22

Not on your lists

comp(24758..26614)
DNA (1857bp) protein (619aa)
mod; type III restriction-modification system methyltransferase (EC:2.1.1.72)
Site-specific DNA-methyltransferase n=1 Tax=Lactobacillus plantarum subsp. plantarum NC8 RepID=H3P2M6_LACPN
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:KKU78071.1}; TaxID=1618845 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_64.;"
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_23
R_OD1_Nomurabacteria_38_19, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(26799..26996)
DNA (198bp) protein (66aa)
hypothetical protein
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_38_19_curated
hypothetical protein id=15191398 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_24
GWB1_OD1_37_5, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

27075..28667
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QXI4_ISOPI
Uncharacterized protein {ECO:0000313|EMBL:KKQ35282.1}; TaxID=1618742 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_37_5.;"
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_25
unknown

Not on your lists

comp(28678..28800)
DNA (123bp) protein (41aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_26
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

28809..29099
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
hypothetical protein id=67849 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_27
R_RIF_OD1_09_51_11, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

29201..30367
DNA (1167bp) protein (389aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_51_11_curated
id=2008683 bin=GWD2_CPR2_39_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_28
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

30522..30701
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003676A4C
Binding domain protein, excisionase family protein {ECO:0000313|EMBL:KKR38305.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_29
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30698..31366
DNA (669bp) protein (223aa)
DNA invertase {ECO:0000313|EMBL:BAR57702.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficie
Putative DNA recombinase id=4790089 bin=GWC2_OD1_43_27 species=Leptospirillum ferrodiazotrophum genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Site-specific recombinase, DNA invertase Pin
RIFCSPHIGHO2_01_FULL_OD1_48_180_rifcsphigho2_01_scaffold_4262_30
Parcubacteria bacterium GW2011_GWA2_52_8, Parcubacteria, Bacteria

Not on your lists

31493..32341
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000367856A
Site-specific recombinase, DNA invertase Pin
Invertase protein {ECO:0000313|EMBL:KKW28555.1}; TaxID=1618857 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_52_8.;"
Displaying items 1-30 of 41 in total

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