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RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_1
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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2..598
DNA (597bp) protein (199aa)
Alanine-tRNA ligase {ECO:0000313|EMBL:KKU52998.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
Alanine--tRNA ligase id=3423167 bin=GWA1_ZB2_49_26 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
alanine--tRNA ligase
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_2
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

598..1743
DNA (1146bp) protein (382aa)
hypothetical protein Tax=GWA2_OD1_47_10b
id=5803402 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_3
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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1747..2976
DNA (1230bp) protein (410aa)
hypothetical protein Tax=GWA2_OD1_47_10b
seg id=5803403 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_4
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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3025..3240
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 Tax=GWA2_OD1_47_10b
Translation initiation factor IF-1 id=2161409 bin=GWA2_CPR4_42_17 species=unknown genus=unknown taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
translation initiation factor IF-1
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_5
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


3422..3808
DNA (387bp) protein (129aa)
SSU ribosomal protein S13p (S18e) {ECO:0000313|EMBL:KKU53002.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
30S ribosomal protein S13 id=4241945 bin=GWC2_OD1_43_27 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
30S ribosomal protein S13
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_6
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


3810..4244
DNA (435bp) protein (145aa)
Ribosomal protein S11 Tax=GWA2_OD1_47_10b
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=5803406 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
SSU ribosomal protein S11p (S14e)
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_7
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


4292..4858
DNA (567bp) protein (189aa)
30S ribosomal protein S4 A Tax=GWA2_OD1_47_10b
ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=119980 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
30S ribosomal protein S4
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_8
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

4868..5830
DNA (963bp) protein (321aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=5803408 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha Tax=GWA2_OD1_47_10b
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_9
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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5834..6184
DNA (351bp) protein (117aa)
50S ribosomal protein L17 n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AI45_IGNAJ
50S ribosomal protein L17 Tax=GWA2_OD1_47_10b
50S ribosomal protein L17
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_10
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


6129..6536
DNA (408bp) protein (136aa)
50S ribosomal protein L13 n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1E5_DESAP
50S ribosomal protein L13 Tax=GWA2_OD1_47_10b
50S ribosomal protein L13
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_11
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


6520..6927
DNA (408bp) protein (136aa)
30S ribosomal protein S9 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD22E
30S ribosomal protein S9 {ECO:0000313|EMBL:KKU53008.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
rpsI; 30S ribosomal protein S9
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_12
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(6965..7867)
DNA (903bp) protein (301aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_13
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

8014..8673
DNA (660bp) protein (220aa)
Transcriptional regulator of heat shock gene n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2634 id=16557 bin=ACD1 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Transcriptional regulator of heat shock gene Tax=GWA2_OD1_47_10b
Transcriptional regulator of heat shock protein
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_14
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

8643..9185
DNA (543bp) protein (181aa)
Protein GrpE Tax=GWA2_OD1_47_10b
GrpE protein; K03687 molecular chaperone GrpE id=5803413 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
GrpE protein HSP-70 cofactor
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_15
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

9201..11105
DNA (1905bp) protein (635aa)
Chaperone protein DnaK {ECO:0000313|EMBL:KKU85513.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Chaperone protein DnaK id=2823849 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
molecular chaperone DnaK
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_16
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

11089..12021
DNA (933bp) protein (311aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_17
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

12018..13073
DNA (1056bp) protein (352aa)
Chaperone protein DnaJ Tax=GWA2_OD1_47_10b
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=5803415 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
dnaJ; chaperone protein DnaJ
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_18
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(13094..13273)
DNA (180bp) protein (60aa)
hypothetical protein Tax=GWA2_OD1_47_10b
Uncharacterised protein family PGPGW, transmembrane id=5801687 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_19
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(13278..14285)
DNA (1008bp) protein (336aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU85517.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Putative uncharacterized protein id=1916078 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_7161_20
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(14282..16999)
DNA (2718bp) protein (906aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DUL3_9BACT
ATPase Tax=GWA2_OD1_47_10b
P-type HAD superfamily ATPase
Displaying 20 items

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