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RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_1
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..4869)
DNA (4869bp) protein (1623aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU76286.1}; Flags: Fragment;; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.;"
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_2
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(5009..5689)
DNA (681bp) protein (227aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000313|EMBL:KKU52174.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
Ribosomal RNA small subunit methyltransferase I id=2720594 bin=GWA1_ZB2_49_26 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
putative S-adenosylmethionine-dependent methyltransferase, YraL family
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_3
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(5693..6133)
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=GWA2_OD1_47_10b
hypothetical protein SclubJA_09178 id=2073028 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_4
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

6171..7172
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035F059C
Uncharacterized protein {ECO:0000313|EMBL:KKU76283.1}; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.;"
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_5
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(7169..7492)
DNA (324bp) protein (108aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_6
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(7518..8423)
DNA (906bp) protein (302aa)
Conserved protein Tax=GWA2_OD1_47_10b
rsgI; RsgI id=15190647 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
conserved hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_7
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(8496..10316)
DNA (1821bp) protein (607aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=uncultured bacterium RepID=K2G5H5_9BACT
Isomerizing Glutamine-fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:KKU76280.1}; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011
glmS; glucosamine 6-phosphate synthetase
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_8
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(10346..11077)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FJT7_9BACT
Multi-copper polyphenol oxidoreductase, laccase {ECO:0000313|EMBL:KKU76279.1}; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_9
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(11081..11590)
DNA (510bp) protein (170aa)
Nuclear protein SET n=1 Tax=Leptonema illini DSM 21528 RepID=H2CC30_9LEPT
Nuclear protein SET {ECO:0000313|EMBL:KKU86395.1}; Flags: Fragment;; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
nuclear protein SET
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_10
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(11591..12034)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CY19_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU52167.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
NUDIX hydrolase
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_11
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(12112..12642)
DNA (531bp) protein (177aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_12
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(12661..14193)
DNA (1533bp) protein (511aa)
chy:CHY_1068 guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] id=85293 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Glutamine-hydrolyzing GMP synthase {ECO:0000313|EMBL:KKU86392.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
GMP synthase, large subunit
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_13
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

14292..14552
DNA (261bp) protein (87aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_14
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(14652..15065)
DNA (414bp) protein (138aa)
Maf-like protein n=2 Tax=Bacteria RepID=V5RW60_9BACT
Maf-like protein Tax=GWA2_OD1_47_10b
Maf-like protein
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_15
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(15069..15551)
DNA (483bp) protein (161aa)
7,8-dihydro-8-oxoguanine triphosphatase {ECO:0000313|EMBL:KKU86389.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
hypothetical protein id=5801887 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
NUDIX hydrolase
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_16
RLO_RIF_OD1_02_44_15, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(15624..16085)
DNA (462bp) protein (154aa)
putative glyoxalase
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_02_44_15_curated
hypothetical protein id=15189203 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_17
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16107..16529)
DNA (423bp) protein (141aa)
NUDIX hydrolase n=1 Tax=uncultured bacterium RepID=K1YCM7_9BACT
NTP pyrophosphohydrolase, Zn-finger domain protein {ECO:0000313|EMBL:KKR85932.1}; TaxID=1618985 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
mutT-like protein
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_18
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(16519..19125)
DNA (2607bp) protein (869aa)
Protein translocase subunit SecA {ECO:0000313|EMBL:KKU86388.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Protein translocase subunit SecA id=1956098 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
secA; preprotein translocase subunit SecA
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_19
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(19173..19538)
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU86387.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
UPI00020A96D2 related cluster id=4242127 bin=GWC2_OD1_43_27 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_20
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(19547..20524)
DNA (978bp) protein (326aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=GWA2_OD1_47_10b
UDP-N-acetylenolpyruvoylglucosamine reductase id=1930746 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_21
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

20839..22179
DNA (1341bp) protein (447aa)
Sugar transferase {ECO:0000313|EMBL:KKU86385.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Sugar transferase id=3506692 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
sugar transferase
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_22
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(22154..23101)
DNA (948bp) protein (316aa)
UDP-glucose/GDP-mannose dehydrogenase dimerization {ECO:0000313|EMBL:KKU86384.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
UDP-glucose/GDP-mannose dehydrogenase dimerization id=4077955 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_8721_23
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(23109..23576)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU52155.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
Displaying 23 items

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