ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_1
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

comp(3..1238)
DNA (1236bp) protein (412aa)
Cell divisionFtsK/SpoIIIE (Fragment) Tax=GWA2_OD1_47_10b
putative cell division FtsK/SpoIIIE id=15189693 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
cell division protein FtsK
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_2
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(1280..4849)
DNA (3570bp) protein (1190aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037A4755
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKU86207.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_3
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(4862..8092)
DNA (3231bp) protein (1077aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C611A
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:KKU86208.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_4
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(8342..9169)
DNA (828bp) protein (276aa)
preprotein translocase subunit SecF n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B4F5B6
Protein translocase subunit SecF {ECO:0000313|EMBL:KKU86209.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
secF; preprotein translocase subunit SecF
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_5
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(9219..10517)
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361ED4C
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KKU86210.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
protein-export membrane protein SecD
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_6
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(10571..12079)
DNA (1509bp) protein (503aa)
Thymidylate synthase, putative n=1 Tax=Raphidiopsis brookii D9 RepID=D4TUX5_9NOST id=96190 bin=ACD63 species=Raphidiopsis brookii genus=Raphidiopsis taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Thymidylate synthase-like protein {ECO:0000313|EMBL:KKU86211.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
thymidylate synthase-like
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_7
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(12045..13184)
DNA (1140bp) protein (380aa)
Deoxycytidine deaminase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YJY6_MOBAS id=133708 bin=ACD81 species=Aurantimonas manganoxydans genus=Aurantimonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
2-deoxycytidine 5-triphosphate deaminase {ECO:0000313|EMBL:KKU86212.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
2'-deoxycytidine 5'-triphosphate deaminase
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_8
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(13193..13831)
DNA (639bp) protein (213aa)
thymidylate kinase (EC:2.7.4.9)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00035C1EF2
Thymidylate kinase {ECO:0000313|EMBL:KKU86213.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_9
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


comp(13885..14310)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 {ECO:0000313|EMBL:KKU52814.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
50S ribosomal protein L11 id=3736863 bin=GWC2_OD1_43_27 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
50S ribosomal protein L11
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_10
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(14338..14883)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000366B9C3
Transcription antitermination protein nusG {ECO:0000313|EMBL:KKU86215.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
NusG antitermination factor
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_11
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(14890..15084)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000368D926
Preprotein translocase, SecE subunit {ECO:0000313|EMBL:KKU86216.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_9677_12
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists

comp(15292..15960)
DNA (669bp) protein (223aa)
Transposase {ECO:0000313|EMBL:KKU86217.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
Transposase id=4390398 bin=GWC2_OP3_44_8 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
Displaying 12 items

View Taxonomy