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RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_1
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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79..636
DNA (558bp) protein (186aa)
50S ribosomal protein L3 {ECO:0000313|EMBL:KKU86076.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
rplC; Ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5802993 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L3
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_2
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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640..1281
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000379857F
50S ribosomal protein L4 {ECO:0000313|EMBL:KKU86077.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
rplD; 50S ribosomal protein L4
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_3
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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1283..1681
DNA (399bp) protein (133aa)
50S ribosomal protein L23 Tax=GWA2_OD1_47_10b
50S ribosomal protein L23 id=2824337 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
ribosomal protein L25/L23
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_4
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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1688..2515
DNA (828bp) protein (276aa)
50S ribosomal protein L2 Tax=GWA2_OD1_47_10b
50S ribosomal protein L2, plastid id=5227350 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplB; 50S ribosomal protein L2
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_5
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists


2517..2849
DNA (333bp) protein (111aa)
Ribosomal protein S19 {ECO:0000313|EMBL:KKU86080.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
30S ribosomal protein S19 id=5227349 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S19
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_6
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


2862..3233
DNA (372bp) protein (124aa)
50S ribosomal protein L22 Tax=GWA2_OD1_47_10b
50S ribosomal protein L22 id=2151939 bin=GWD2_CPR2_39_7 species=Amycolicicoccus subflavus genus=Amycolicicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
50S ribosomal protein L22
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_7
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


3235..3897
DNA (663bp) protein (221aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GVT1_9ZZZZ
30S ribosomal protein S3 Tax=GWA2_OD1_47_10b
SSU ribosomal protein S3P
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_8
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

Not on your lists


3899..4312
DNA (414bp) protein (138aa)
50S ribosomal protein L16 {ECO:0000313|EMBL:KKU86083.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=15190546 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rplP; 50S ribosomal protein L16
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_9
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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4309..4497
DNA (189bp) protein (63aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_10
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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4494..4742
DNA (249bp) protein (83aa)
30S ribosomal protein S17 n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=RS17_THELT
30S ribosomal protein S17 Tax=GWA2_OD1_47_10b
30S ribosomal protein S17
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_11
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


4739..5104
DNA (366bp) protein (122aa)
50S ribosomal protein L14 Tax=GWA2_OD1_47_10b
50S ribosomal protein L14 id=3736637 bin=GWC2_OD1_43_27 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
rplN; 50S ribosomal protein L14
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_12
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


5101..5409
DNA (309bp) protein (103aa)
50S ribosomal protein L24 Tax=GWA2_OD1_47_10b
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=17294 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
LSU ribosomal protein L24P
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_13
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


5406..5951
DNA (546bp) protein (182aa)
50S ribosomal protein L5 Tax=GWA2_OD1_47_10b
50S ribosomal protein L5 id=2824244 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rplE; 50S ribosomal protein L5
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_14
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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6091..7506
DNA (1416bp) protein (472aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_15
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


7787..8182
DNA (396bp) protein (132aa)
30S ribosomal protein S8 Tax=GWA2_OD1_47_10b
30S ribosomal protein S8 id=2154486 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S8
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_16
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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8189..8731
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035D517A
50S ribosomal protein L6 Tax=GWA2_OD1_47_10b
rplF; 50S ribosomal protein L6
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_17
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


8740..9087
DNA (348bp) protein (116aa)
50S ribosomal protein L18 n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MYX3_9FIRM
50S ribosomal protein L18 Tax=GWA2_OD1_47_10b
50S ribosomal protein L18
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_18
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


9111..9611
DNA (501bp) protein (167aa)
30S ribosomal protein S5 Tax=GWA2_OD1_47_10b
30S ribosomal protein S5 id=3423186 bin=GWA1_ZB2_49_26 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
30S ribosomal protein S5
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_19
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


9580..9975
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003794552
Uncharacterized protein {ECO:0000313|EMBL:KKU52492.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_20
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists


9972..11252
DNA (1281bp) protein (427aa)
Protein translocase subunit SecY {ECO:0000313|EMBL:KKU52491.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
id=5227335 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
preprotein translocase subunit SecY
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_21
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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11272..11964
DNA (693bp) protein (231aa)
Adenylate kinase Tax=GWA2_OD1_47_10b
Adenylate kinase id=2824204 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
adenylate kinase
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_22
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

11961..12722
DNA (762bp) protein (254aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] id=5227331 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase Tax=GWA2_OD1_47_10b
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_23
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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comp(12719..12988)
DNA (270bp) protein (90aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_24
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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13071..13721
DNA (651bp) protein (217aa)
Putative uncharacterized protein Tax=GWA2_OD1_47_10b
Transposase id=2882195 bin=GWF2_OP3_43_52 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_25
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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13728..14129
DNA (402bp) protein (134aa)
Putative Holliday junction resolvase Tax=GWA2_OD1_47_10b
Putative Holliday junction resolvase id=2824195 bin=GWC1_OD1_38_17 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Holliday junction resolvase YqgF
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_26
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

14142..14882
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036375A1
Glycosyl transferase family protein Tax=GWA2_OD1_47_10b
glycosyl transferase family protein
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_27
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

14866..15882
DNA (1017bp) protein (339aa)
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] id=133116 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
galT; galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase Tax=GWA2_OD1_47_10b
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_28
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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15884..16645
DNA (762bp) protein (254aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=uncultured prokaryote RepID=H5SEK8_9ZZZZ
Triosephosphate isomerase {ECO:0000313|EMBL:KKU52483.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_29
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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16624..17769
DNA (1146bp) protein (382aa)
Phosphoglycerate kinase Tax=GWA2_OD1_47_10b
Phosphoglycerate kinase id=5227510 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
pgk; phosphoglycerate kinase
RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_6249_30
GWA2_OD1_47_10b, Parcubacteria, Bacteria

Not on your lists

17774..18430
DNA (657bp) protein (219aa)
hypothetical protein Tax=GWA2_OD1_47_10b
Displaying items 1-30 of 33 in total

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