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RIFCSPHIGHO2_01_FULL_OD1_48_80_rifcsphigho2_01_scaffold_57689_6

Organism: Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_80

partial RP 37 / 55 MC: 1 BSCG 37 / 51 ASCG 7 / 38
Location: comp(2675..3289)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor {ECO:0000313|EMBL:KKU53075.1}; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 204.0
  • Bit_score: 351
  • Evalue 8.40e-94
sigma-24 (FecI-like protein); K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5802740 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 188.0
  • Bit_score: 181
  • Evalue 8.20e-43
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 204.0
  • Bit_score: 107
  • Evalue 5.60e-21

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Taxonomy

GWA2_OD1_47_10b → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGGAAATAACCGACAAACAGTTAATTGATGACTATCTAAACGGGAACGACGCCGCGTTTGCTCTTTTGGTCCAAAGACAAATCAATCCGGTCTATAATTTTGTATATCGTTTAGTAAGAAATACGCAGGACGCCGAAGATATTACGCAAGAAACATTTGTAAAAATGTGGAAAAAnnnnnnnnnnnnnnnnnnCGAAGATATTACGCAAGAAACATTTGTAAAAATGTGGAAAAATCTCAAGCGCTACAATCAAGACCAGAATTTTAAAACATGGCTTTTTACAATCGCGCGAAATACGGCGATCGACTCGCTTCGCAAAAAGAAAAGTTTTGTGTTTTCGGATTTCGAGATTGCCGACGGCAAAAATCCGTTTCTTGACACACTCGCCGATCCAGCGCCACTACCTGACGAGCTTGCCGCGCGCGCGGAGAGGCAAACGCTTTTTGAGAGCGCGCTCGGCAAACTCTCGCTCGCCTATCAAGAAGTATTCACATTGCGCCATGAAAGCGATCTCACGTTTGATGAAATCGGCGCCCGGCTCGGAAAATCCATAAATACCGTCAAAAGTCAGTACCGAAGAGCGCTTTTAACGCTACAAAAACTGCTCACTTGA
PROTEIN sequence
Length: 205
MEITDKQLIDDYLNGNDAAFALLVQRQINPVYNFVYRLVRNTQDAEDITQETFVKMWKXXXXXXXEDITQETFVKMWKNLKRYNQDQNFKTWLFTIARNTAIDSLRKKKSFVFSDFEIADGKNPFLDTLADPAPLPDELAARAERQTLFESALGKLSLAYQEVFTLRHESDLTFDEIGARLGKSINTVKSQYRRALLTLQKLLT*