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RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_1
RHI_SM2F11_48_16, SM2F11, Bacteria

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617..3586
DNA (2970bp) protein (990aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein id=5801228 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_2
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

3576..3950
DNA (375bp) protein (125aa)
transmembrane_regions Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
transmembrane_regions id=5098013 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_3
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

3956..5008
DNA (1053bp) protein (351aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
blue (type 1) copper domain-containing protein id=5101973 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_4
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

4998..5420
DNA (423bp) protein (141aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit id=2166430 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_5
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


5422..6552
DNA (1131bp) protein (377aa)
hypothetical protein; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003827B7C
Phenylalanyl-tRNA synthetase alpha chain
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_6
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

6628..8661
DNA (2034bp) protein (678aa)
DNA gyrase subunit B (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
DNA gyrase subunit B (EC:5.99.1.3)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361FCA2
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_7
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

8860..9045
DNA (186bp) protein (62aa)
Protein translocase subunit SecE n=1 Tax=Desulfovibrio sp. A2 RepID=G2H7E0_9DELT
secE; preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
secE; preprotein translocase subunit SecE
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_8
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

9045..9419
DNA (375bp) protein (125aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_9
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

9421..9966
DNA (546bp) protein (182aa)
nusG; transcription antitermination factor Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=96199 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
nusG; transcription antitermination factor
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_10
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

9972..10727
DNA (756bp) protein (252aa)
spfh domain, band 7 family protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
SPFH domain, band 7 family protein id=8154 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
spfh domain, band 7 family protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_11
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


10741..11163
DNA (423bp) protein (141aa)
50S ribosomal protein L11 n=1 Tax=uncultured bacterium RepID=K2E0Q1_9BACT
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
50S ribosomal protein L11
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_12
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

11231..11566
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BZR5_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_13
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


11600..12313
DNA (714bp) protein (238aa)
rplA; 50S ribosomal protein L1 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
50S ribosomal protein L1 id=3479532 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplA; 50S ribosomal protein L1
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_14
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

12370..12963
DNA (594bp) protein (198aa)
dCTP deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
deoxycytidine triphosphate deaminase; K01494 dCTP deaminase [EC:3.5.4.13] id=14628880 bin=bin8_Chloro species=Curtobacterium ginsengisoli genus=Curtobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
dCTP deaminase (EC:3.5.4.13)
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_15
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

12960..13652
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BAL5_9BACL
type 12 methyltransferase Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
type 12 methyltransferase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_16
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

13671..14111
DNA (441bp) protein (147aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CIW6_9BACT
deoxyuridine 5'-triphosphate nucleotidohydrolase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_17
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

14104..14778
DNA (675bp) protein (225aa)
tmk; thymidylate kinase Tmk (EC:2.7.4.9)
tmk; thymidylate kinase Tmk Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Thymidylate kinase id=1987545 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_18
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

14790..16487
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YYM1_9BACT
thyX; thymidylate synthase ThyX Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
thyX; thymidylate synthase ThyX
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_8225_19
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

16474..17172
DNA (699bp) protein (233aa)
putative phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
putative phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] id=85161 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
phosphatase
Displaying 19 items

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