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RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_1
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_2
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(165..335)
DNA (171bp) protein (57aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_3
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(417..1169)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DGB0_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_4
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(1418..1603)
DNA (186bp) protein (62aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_5
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(1606..2145)
DNA (540bp) protein (180aa)
seg 102..113 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
seg 102..113 id=6230 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_6
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(2332..4548)
DNA (2217bp) protein (739aa)
polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S3L0_THEOJ
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_7
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


comp(4738..5004)
DNA (267bp) protein (89aa)
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 id=5098953 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version
30S ribosomal protein S15
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_8
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

5176..5478
DNA (303bp) protein (101aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_9
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

5694..6677
DNA (984bp) protein (328aa)
putative Tyrosine recombinase xerD Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Tyrosine recombinase XerC id=2438565 bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
putative Tyrosine recombinase xerD
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_10
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(6784..8583)
DNA (1800bp) protein (600aa)
xenobiotic-transporting ATPase (EC:3.6.3.44); K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Xenobiotic-transporting ATPase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENR8_RUNSL
xenobiotic-transporting ATPase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_11
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(8608..9519)
DNA (912bp) protein (304aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_12
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(9537..9761)
DNA (225bp) protein (75aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_13
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(9823..10467)
DNA (645bp) protein (215aa)
Protein-disulfide isomerase n=1 Tax=uncultured bacterium RepID=K2EAJ4_9BACT
protein-disulfide isomerase Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
protein-disulfide isomerase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_14
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(10473..10571)
DNA (99bp) protein (33aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_15
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(10558..10983)
DNA (426bp) protein (142aa)
Disulfide bond formation protein DsbB n=1 Tax=uncultured bacterium RepID=K2CWW1_9BACT
disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
disulfide bond formation protein C
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_16
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(10999..11619)
DNA (621bp) protein (207aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_17
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(11629..12024)
DNA (396bp) protein (132aa)
Mannose-6-phosphate isomerase Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein id=89214 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Mannose-6-phosphate isomerase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_18
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(12077..12619)
DNA (543bp) protein (181aa)
DoxX family protein n=1 Tax=uncultured bacterium RepID=K1Z430_9BACT
DoxX family protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
DoxX family protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_19
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(12634..12999)
DNA (366bp) protein (122aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Putative membrane protein id=5095168 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_20
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

13147..14628
DNA (1482bp) protein (494aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VDQ6_9RHOB id=8193 bin=ACD15 species=Maritimibacter alkaliphilus genus=Maritimibacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
Glutathione-regulated potassium-efflux system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_21
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(14642..16612)
DNA (1971bp) protein (657aa)
copB; putative copper-exporting P-type ATPase B (EC:3.6.3.4) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
copB; putative copper-exporting P-type ATPase B (EC:3.6.3.4)
Putative copper-exporting P-type ATPase B n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PUP1_9BACT
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_22
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(16614..16868)
DNA (255bp) protein (85aa)
transmembrane_regions 21..40 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
transmembrane_regions 21..40 id=124705 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_23
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(16887..17306)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLZ2_9BACT
conserved exported protein of unknown function Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
conserved exported protein of unknown function
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_24
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(17327..17596)
DNA (270bp) protein (90aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Uncharacterized protein id=7721506 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_25
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(17602..17943)
DNA (342bp) protein (114aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_26
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(17940..18722)
DNA (783bp) protein (261aa)
cytochrome c biogenesis protein, transmembrane region Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Putative uncharacterized protein id=3737003 bin=GWC2_OD1_43_27 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
cytochrome c biogenesis transmembrane protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_27
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(18825..19328)
DNA (504bp) protein (168aa)
Hypothetical conserved protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Hypothetical conserved protein id=5801799 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_28
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(19403..19903)
DNA (501bp) protein (167aa)
RNHCP domain protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6KMN6_STRNV
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_29
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

20027..20713
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Bacillus atrophaeus UCMB-5137 RepID=R0PA93_BACAT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_3583_30
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

20716..21591
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Bacillus cereus HuA3-9 RepID=R8CM67_BACCE
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
Displaying items 1-30 of 36 in total

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