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RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_14

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_50_67

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(15755..16297)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 356
  • Evalue 3.00e-95
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5802028 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) similarity UNIREF
DB: UNIREF100
  • Identity: 36.0
  • Coverage: 175.0
  • Bit_score: 133
  • Evalue 2.30e-28
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 177.0
  • Bit_score: 118
  • Evalue 1.60e-24

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Taxonomy

RHI_SM2F11_48_16 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 543
ATGACTGACTCGGAACTCAAACAATTCTTAGAAAGGGCCCAAAACGGCGATAGCGCGGCATTTTCCCGCCTTTACGATGAATTTGCCGAAAAGCTATACCGCTTTATTTTCTTCCGCGTCGGCCACAAAGAAGTCGCCGAGGACCTCCTGTCCGACACTTTTGTCAAAGCTTGGCAAAAATTAAAACAAGTCAACTCCCCCGCGGCCATAACCGGCTGGTTCTACCAGATCGCCCGAAACAACATCATCGATTACTATCGGATCAAGAAAGATTTTGTCCCACTCGAAGAAGTGGCCGAATTTCTGGAAGACGCAGTCAACCCGATCGATACGATCAATCTGAATATGGACCAGGCCAAAATTTTGGAACTGCTGGTCAAGCTGCCCGGTGAACAACGGCTCGTACTCCAATATAAATTTTTTGAAGACTTAACGAACGAAGAGATCGCCTACATCTTAAATAAAACCGAAGGCGCCATTCGTGTCATTCAGCACCGCGCGCTCATCAAATTGAAAGACTTAGTCAAACGCAAGTCCAAATAA
PROTEIN sequence
Length: 181
MTDSELKQFLERAQNGDSAAFSRLYDEFAEKLYRFIFFRVGHKEVAEDLLSDTFVKAWQKLKQVNSPAAITGWFYQIARNNIIDYYRIKKDFVPLEEVAEFLEDAVNPIDTINLNMDQAKILELLVKLPGEQRLVLQYKFFEDLTNEEIAYILNKTEGAIRVIQHRALIKLKDLVKRKSK*