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RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562

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Displaying items 1-30 of 111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_1
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

118..3138
DNA (3021bp) protein (1007aa)
hypothetical protein cdiviTM7_00597 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B267F id=137158 bin=ACD8 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
hypothetical protein cdiviTM7_00597 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_2
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

3135..4436
DNA (1302bp) protein (434aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_3
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

4568..5008
DNA (441bp) protein (147aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVF5_9BACT
twitching motility protein PilT; K07063 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
twitching motility protein PilT
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_4
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

5094..5456
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003771702
S23 ribosomal protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
S23 ribosomal protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_5
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

5484..5927
DNA (444bp) protein (148aa)
hypothetical protein
id=4731921 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
id=4731921 bin=GWC2_OD1_43_27 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_6
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

5884..6627
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZHE6_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_7
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

6732..7037
DNA (306bp) protein (102aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein id=5803085 bin=OD1_GWC2_34_28 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_8
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

7082..8917
DNA (1836bp) protein (612aa)
Type IV secretory pathway VirB4 protein-like protein n=1 Tax=uncultured bacterium RepID=K1ZYC6_9BACT
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Type IV secretory pathway VirB4 components-like protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_9
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

8921..10294
DNA (1374bp) protein (458aa)
Putative transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G734_9DELT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_10
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

10306..11337
DNA (1032bp) protein (344aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_11
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(11338..13377)
DNA (2040bp) protein (680aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
det:DET1268 recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.1.-] id=96609 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
ATP-dependent DNA helicase RecG
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_12
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(13830..14339)
DNA (510bp) protein (170aa)
seg Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
seg id=5091659 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_13
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(14683..15753)
DNA (1071bp) protein (357aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_14
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(15755..16297)
DNA (543bp) protein (181aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5802028 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
ECF subfamily RNA polymerase sigma-24 subunit
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_15
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(16360..16920)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AVL9_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_16
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

17321..17896
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI000363F762
RNA polymerase sigma factor SigW Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RNA polymerase sigma factor SigW
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_17
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

17886..18632
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI00037DC414
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_18
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

18668..18799
DNA (132bp) protein (44aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_19
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

18796..19236
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI000368DED7
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_20
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

19351..21066
DNA (1716bp) protein (572aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=uncultured bacterium RepID=K1YLF3_9BACT
secretion protein hlyd; K02005 HlyD family secretion protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
secretion protein hlyd
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_21
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

21076..21792
DNA (717bp) protein (239aa)
PhnL; ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
PhnL; ABC transporter; K02003 putative ABC transport system ATP-binding protein id=5802744 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
PhnL; ABC transporter
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_22
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

21782..23017
DNA (1236bp) protein (412aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein id=133565 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_23
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

23049..23507
DNA (459bp) protein (153aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Predicted protein id=1916096 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_24
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

23777..24193
DNA (417bp) protein (139aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_25
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

24339..24710
DNA (372bp) protein (124aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_26
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(24866..25576)
DNA (711bp) protein (237aa)
amidophosphoribosyltransferase-like protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
ComF family protein id=4095023 bin=GWF2_CPR3_35_18 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_CPR3_35_18 organism_group=CPR3
amidophosphoribosyltransferase-like protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_27
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(25597..28116)
DNA (2520bp) protein (840aa)
clpC; Clp protease, ATP-binding subunit ClpC; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
clpC; Clp protease, ATP-binding subunit ClpC
ATPase AAA-2 domain protein id=4926589 bin=GWC2_CPR2_39_35 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_CPR2_39_35 organism_group=CPR2 organism_desc=Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_28
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

28370..28861
DNA (492bp) protein (164aa)
Regulatory protein RecX n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MSQ7_9BACT
regulatory protein RecX; K03565 regulatory protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
recX; regulatory protein RecX
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_29
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(28836..29717)
DNA (882bp) protein (294aa)
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
HtpX-2 peptidase; K03799 heat shock protein HtpX [EC:3.4.24.-] id=86325 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_562_30
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(29798..30346)
DNA (549bp) protein (183aa)
LemA-like protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B255F id=16707 bin=ACD1 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
LemA-like protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
membrane protein
Displaying items 1-30 of 111 in total

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