ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_2

Organism: Candidatus Doudnabacteria bacterium RIFCSPHIGHO2_01_FULL_50_67

near complete RP 48 / 55 MC: 3 BSCG 46 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(167..913)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TrmB n=1 Tax=Burkholderia sp. Ch1-1 RepID=D5NS62_9BURK id=28027 bin=ACD24 species=Burkholderia sp. Ch1-1 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD24 organism_group=WWE3 organism_desc=WWE3 similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 246.0
  • Bit_score: 190
  • Evalue 2.80e-45
transcriptional regulator TrmB Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 248.0
  • Bit_score: 491
  • Evalue 6.30e-136
transcriptional regulator TrmB similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 243.0
  • Bit_score: 102
  • Evalue 1.70e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_SM2F11_48_16 → SM2F11 → Bacteria

Sequences

DNA sequence
Length: 747
ATGGAAATCGCAGAAATACTGGAGAAAATCGGATTAAACCAAAAAGAAGCCATGGTCTATATGGCTTTATTGGAATTGGGTACCTCTTCAGTTGAAGGGATCGCCAAGAAAGCGGGGACTAAGCGCCCCACGACTTATCTGATCCTCGACGAGCTACAGAAGAAGGGATTGGCCGCTCTAGTACCGCGAGCGAAGAAGATTTTATACATGCCAGAGTCGCCGGACAAAATCCTCTCGGATCTGAATCGCAAACAAGAGCTAGTCAAAAGGTTCATGCCTAACCTACTGGCCGTCTATAATGAACCAAAAAATAAACCACAGGTTTTATTGTTTGAAGGCAAAGAAGCGATAAAAGATTTATATGATAAAATTTTAAATGCCAAAGAGGTTATTTTTTTCGGCACTATCCGAGATTTTGTCACCATCTATCCGGATTATGAAAAAAAGTTAGTTGCCAACACACTGGCCAAAAAAACTAAAGTCTTGGAGATTTTGACTCAAAATCCCGCGGACCTCAAATTCGCGGAAAATGTAACTCATACTGAATATTACCAACAACGATTTACCAAACCCGGAGAAGAATTTCTCACAGATAATTGCTTATTCGATGGCAACGTGGTGTTTTTTTCCTATCAACCGCATATTTTTGCTGTATTAATTCAAAGCAAAACCATTCATCAGTCGCTTCGGACATTATTTGAGTTTGCTTGGAAACAAGCGGAGCCGTATGATAAGATTATAAAATAA
PROTEIN sequence
Length: 249
MEIAEILEKIGLNQKEAMVYMALLELGTSSVEGIAKKAGTKRPTTYLILDELQKKGLAALVPRAKKILYMPESPDKILSDLNRKQELVKRFMPNLLAVYNEPKNKPQVLLFEGKEAIKDLYDKILNAKEVIFFGTIRDFVTIYPDYEKKLVANTLAKKTKVLEILTQNPADLKFAENVTHTEYYQQRFTKPGEEFLTDNCLFDGNVVFFSYQPHIFAVLIQSKTIHQSLRTLFEFAWKQAEPYDKIIK*