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RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_1
RHI_SM2F11_48_16, SM2F11, Bacteria

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comp(3..161)
DNA (159bp) protein (53aa)
Probable transcriptional regulatory protein OSCT_0708 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBK7_9CHLR
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_2
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(167..913)
DNA (747bp) protein (249aa)
Transcriptional regulator, TrmB n=1 Tax=Burkholderia sp. Ch1-1 RepID=D5NS62_9BURK id=28027 bin=ACD24 species=Burkholderia sp. Ch1-1 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD24 organism_group=WWE3 organism_desc=WWE3
transcriptional regulator TrmB Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
transcriptional regulator TrmB
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_3
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

1151..2134
DNA (984bp) protein (328aa)
ABC transporter, substrate-binding protein, aliphatic sulfonates family n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WJ45_DESOD
ABC transporter, substrate-binding protein, aliphatic sulfonates family Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
ABC transporter, substrate-binding protein, aliphatic sulfonates family
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_4
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

2131..2913
DNA (783bp) protein (261aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WJ44_DESOD
nitrate/sulfonate/bicarbonate ABC transporter permease; K02050 NitT/TauT family transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
nitrate/sulfonate/bicarbonate ABC transporter permease
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_5
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

2906..3652
DNA (747bp) protein (249aa)
ABC transporter; K10831 taurine transport system ATP-binding protein [EC:3.6.3.36] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
ABC transporter related protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CN08_SYNLT
ABC transporter
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_6
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

3726..4457
DNA (732bp) protein (244aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_7
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

4696..5349
DNA (654bp) protein (218aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_8
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


comp(5400..7859)
DNA (2460bp) protein (820aa)
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3)
DNA gyrase subunit A id=2934025 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_9
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(7846..8394)
DNA (549bp) protein (183aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_10
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(8398..9027)
DNA (630bp) protein (210aa)
Zn-dependent hydrolase of the beta-lactamase fold-like protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein id=5801628 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Zn-dependent hydrolase of the beta-lactamase fold-like protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_11
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


9194..10315
DNA (1122bp) protein (374aa)
rpfA; 30S ribosomal protein S1 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein id=5801626 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
30S ribosomal protein S1
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_12
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(10360..11043)
DNA (684bp) protein (228aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_13
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

11454..11936
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HGB8_STRPR id=54128 bin=ACD41 species=Streptomyces pristinaespiralis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
HNH endonuclease Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_14
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

12109..12732
DNA (624bp) protein (208aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_13435_15
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

13030..13215
DNA (186bp) protein (62aa)
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
Displaying 15 items

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