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RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_1
R_OD1_46_25, Parcubacteria, Bacteria

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3..2111
DNA (2109bp) protein (703aa)
DNA gyrase subunit B Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
DNA gyrase subunit B id=3012621 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
gyrB; DNA gyrase subunit B
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_2
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

2149..2763
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Microgenomates bacterium SCGC AAA040-P11 RepID=UPI000375A665
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_3
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

2990..3193
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000368D926
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_4
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

3206..3751
DNA (546bp) protein (182aa)
nusG; transcription antitermination factor Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=3152100 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
antitermination protein NusG
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_5
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists


3970..4392
DNA (423bp) protein (141aa)
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
50S ribosomal protein L11 id=3152102 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rplK; 50S ribosomal protein L11
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_6
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

4525..5190
DNA (666bp) protein (222aa)
dTMP kinase (EC:2.7.4.9)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000368AA93
thymidylate kinase Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_7
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

5192..6655
DNA (1464bp) protein (488aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036DDDF2
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_8
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(6636..7568)
DNA (933bp) protein (311aa)
tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase id=3736869 bin=GWC2_OD1_43_27 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_9
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(7816..9591)
DNA (1776bp) protein (592aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
rmr:Rmar_0623 threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=123723 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_10
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

9823..10239
DNA (417bp) protein (139aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_11
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(10298..13492)
DNA (3195bp) protein (1065aa)
DNA polymerase III catalytic subunit, DnaE type; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000370808A
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_12
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(13780..15219)
DNA (1440bp) protein (480aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Putative uncharacterized protein id=2648849 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_13
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(15203..15832)
DNA (630bp) protein (210aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_14
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(15858..19457)
DNA (3600bp) protein (1200aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035C2901
glycoside hydrolase family protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
cbhB; exoglucanase B
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_15
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

19474..20124
DNA (651bp) protein (217aa)
ribonuclease H (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII id=3013150 bin=GWC1_OD1_38_17 species=Fusobacterium varium genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_16
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

20165..20365
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_17
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

20426..21043
DNA (618bp) protein (206aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_10993_18
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

21147..22502
DNA (1356bp) protein (452aa)
FtsK; DNA segregation ATPase FtsK/SpoIIIE and related proteins; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
DNA translocase FtsK id=2723040 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
DNA translocase FtsK
Displaying 18 items

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