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RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_1
R_OD1_46_25, Parcubacteria, Bacteria

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1..390
DNA (390bp) protein (130aa)
phospholipase D; K06131 cardiolipin synthase [EC:2.7.8.-] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
cls2; cardiolipin synthase (EC:2.7.8.-)
Phospholipase D/Transphosphatidylase id=3013078 bin=GWC1_OD1_38_17 species=unknown genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_2
R_OD1_46_25, Parcubacteria, Bacteria

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451..948
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YE86_9DELT
cytidyltransferase-like enzyme Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
cytidyltransferase-like enzyme
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_3
R_OD1_46_25, Parcubacteria, Bacteria

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952..1659
DNA (708bp) protein (236aa)
undecaprenyl pyrophosphate synthetase; K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific id=3013072 bin=GWC1_OD1_38_17 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
undecaprenyl pyrophosphate synthetase
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_4
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

1891..2352
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D2F8_9FIRM
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_5
R_OD1_46_25, Parcubacteria, Bacteria

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2349..3920
DNA (1572bp) protein (524aa)
translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
chy:CHY_1766 infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=2455 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
translation initiation factor IF-2
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_6
R_OD1_46_25, Parcubacteria, Bacteria

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3922..4287
DNA (366bp) protein (122aa)
rbfA; Ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Ribosome-binding factor A id=3486147 bin=GWA1_ZB2_49_26 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
rbfA; ribosome-binding factor A
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_7
R_OD1_46_25, Parcubacteria, Bacteria

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comp(4507..4992)
DNA (486bp) protein (162aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Putative uncharacterized protein id=3012526 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_8
R_OD1_46_25, Parcubacteria, Bacteria

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comp(5074..6162)
DNA (1089bp) protein (363aa)
Transposase n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZP41_ACICS
transposase Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
transposase
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_9
unknown

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6307..6471
DNA (165bp) protein (55aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_10
R_OD1_46_25, Parcubacteria, Bacteria

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comp(6756..7349)
DNA (594bp) protein (198aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJY2_SYNLT
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_11
R_OD1_46_25, Parcubacteria, Bacteria

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comp(7346..8623)
DNA (1278bp) protein (426aa)
trigger factor; K03545 trigger factor Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Trigger factor id=2824039 bin=GWC1_OD1_38_17 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
trigger factor
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_12
R_OD1_46_25, Parcubacteria, Bacteria

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comp(8713..9243)
DNA (531bp) protein (177aa)
inorganic diphosphatase Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Inorganic pyrophosphatase id=2824044 bin=GWC1_OD1_38_17 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
inorganic diphosphatase
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_13
R_OD1_46_25, Parcubacteria, Bacteria

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comp(9256..10503)
DNA (1248bp) protein (416aa)
NusA antitermination factor Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Transcription termination factor nusa id=2824051 bin=GWC1_OD1_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
NusA antitermination factor
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_14
R_OD1_46_25, Parcubacteria, Bacteria

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comp(10972..12573)
DNA (1602bp) protein (534aa)
leucyl aminopeptidase (EC:3.4.11.1); K01255 leucyl aminopeptidase [EC:3.4.11.1] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase id=3650077 bin=GWA2_Ignavibacteriae_54_16_partial species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_15
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

12679..13314
DNA (636bp) protein (212aa)
hypothetical protein; K07491 putative transposase Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Transposase id=5226892 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
transposase
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5516_16
R_OD1_46_25, Parcubacteria, Bacteria

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comp(13425..20090)
DNA (6666bp) protein (2222aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
hypothetical protein id=5803024 bin=OD1_GWC2_34_28 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell wall surface anchor family protein
Displaying 16 items

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