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RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_1
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(3..998)
DNA (996bp) protein (332aa)
seg 452..466 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
transmembrane_regions 9..31 id=129705 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_2
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

1125..2096
DNA (972bp) protein (324aa)
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase; K00015 glyoxylate reductase [EC:1.1.1.26] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein id=3506657 bin=GWC1_OD1_38_17 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_3
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

2164..2472
DNA (309bp) protein (103aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_4
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists


2459..3139
DNA (681bp) protein (227aa)
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
50S ribosomal protein L25 id=3506654 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_5
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

3156..4517
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035E26E1
peptidase M23B Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
peptidase M23B
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_6
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(4549..5607)
DNA (1059bp) protein (353aa)
Peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Peptide chain release factor 1 id=3506649 bin=GWC1_OD1_38_17 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Peptide chain release factor 1
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_7
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists


comp(5620..5844)
DNA (225bp) protein (75aa)
50S ribosomal protein L31 n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037FEE18
LSU ribosomal protein L31P; K02909 large subunit ribosomal protein L31 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
LSU ribosomal protein L31P
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_8
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

5942..6364
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AAM0_9BACT
hypothetical protein; K08978 putative membrane protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_9
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

6370..6963
DNA (594bp) protein (198aa)
3-methyladenine DNA glycosylase (EC:3.2.2.-); K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase id=3012625 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_10
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(7024..7668)
DNA (645bp) protein (215aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_11
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

7794..8111
DNA (318bp) protein (106aa)
Nudix 8..162 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Nudix 8..162 id=86315 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_12
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

8108..8245
DNA (138bp) protein (46aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_13
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

8355..8912
DNA (558bp) protein (186aa)
ORF13 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
ORF13 id=4731751 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_14
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

9047..10702
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003725974
glucose/sorbosone dehydrogenase Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
glucose/sorbosone dehydrogenase
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_15
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

10775..11143
DNA (369bp) protein (123aa)
id=3423172 Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
id=3423172 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_16
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

11246..12391
DNA (1146bp) protein (382aa)
metallophosphoesterase Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
metallophosphoesterase id=1242709 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
metallophosphoesterase
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_17
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

12472..14550
DNA (2079bp) protein (693aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
SMC domain-containing protein; K03546 exonuclease SbcC id=5102047 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_18
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

14557..14949
DNA (393bp) protein (131aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_19
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

15075..15365
DNA (291bp) protein (97aa)
chaperonin Cpn10; K04078 chaperonin GroES Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
10 kDa chaperonin id=2823896 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
chaperonin Cpn10
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_20
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

15415..17046
DNA (1632bp) protein (544aa)
chaperonin GroEL; K04077 chaperonin GroEL Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
60 kDa chaperonin id=2823893 bin=GWC1_OD1_38_17 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
chaperonin GroEL
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_21
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

17124..18068
DNA (945bp) protein (315aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase id=3501611 bin=GWA1_ZB2_49_26 species=Blautia hansenii genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_22
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

18412..18828
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000382823D
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_23
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

18834..21536
DNA (2703bp) protein (901aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000362505B
Preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Preprotein translocase subunit SecA
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_24
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

21623..21973
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Putative uncharacterized protein id=3543940 bin=GWA1_ZB2_49_26 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_25
GWA2_OD1_47_10, Parcubacteria, Bacteria

Not on your lists

22318..22977
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F1G3_9BACT
Peptidase S51 dipeptidase E Tax=GWA2_OD1_47_10
peptidase S51 dipeptidase E
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_26
GWA1_OD1_53_13_partial, Parcubacteria, Bacteria

Not on your lists

22986..23318
DNA (333bp) protein (111aa)
Probable divalent-cation tolerance protein n=1 Tax=uncultured archaeon RepID=D1J918_9ARCH
Probable divalent-cation tolerance protein Tax=GWA1_OD1_53_13_partial
CutA1 divalent ion tolerance protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_27
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

23338..23688
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Putative uncharacterized protein id=3543940 bin=GWA1_ZB2_49_26 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_28
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

24033..24518
DNA (486bp) protein (162aa)
peptidase S51 dipeptidase E; K05995 dipeptidase E [EC:3.4.13.21] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
peptidase S51 dipeptidase E; K05995 dipeptidase E [EC:3.4.13.21] id=16501 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
peptidase S51 dipeptidase E
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_29
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

24525..25088
DNA (564bp) protein (188aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Putative uncharacterized protein id=3688777 bin=PER_GWC2_41_7 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_5865_30
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

25094..25396
DNA (303bp) protein (101aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Putative uncharacterized protein id=2598226 bin=GWC1_OD1_38_17 species=unknown genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
Displaying items 1-30 of 35 in total

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