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RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_1
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(2..1057)
DNA (1056bp) protein (352aa)
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EK66_9BACT
N-acyl-D-aspartate/D-glutamate deacylase Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_2
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(1354..1632)
DNA (279bp) protein (93aa)
AbrB family transcriptional regulator Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
AbrB family transcriptional regulator id=14424531 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_3
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(1810..2745)
DNA (936bp) protein (312aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_4
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(2752..3222)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FLZ4_9EURY
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_5
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(3215..3754)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248F5A6
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_6
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(3761..4810)
DNA (1050bp) protein (350aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13) Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=3544703 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_7
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(4807..5973)
DNA (1167bp) protein (389aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Protein containing Peptidase S11, D-alanyl-D-alanine carboxypeptidase A domain id=3544701 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_8
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(5948..6454)
DNA (507bp) protein (169aa)
chromosome segregation and condensation protein ScpB; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Segregation and condensation protein B id=3544699 bin=GWC1_OD1_38_17 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
chromosome segregation and condensation protein ScpB
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_9
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(6456..7160)
DNA (705bp) protein (235aa)
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Segregation and condensation protein A id=3544695 bin=GWC1_OD1_38_17 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
scpA; segregation and condensation protein A
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_10
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

7202..8554
DNA (1353bp) protein (451aa)
sugar transferase Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Sugar transferase id=3506692 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
sugar transferase
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_11
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(8709..12269)
DNA (3561bp) protein (1187aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
DNA-directed RNA polymerase subunit beta' id=2723037 bin=GWC1_OD1_38_17 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
DNA-directed RNA polymerase subunit beta'
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_12
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(12523..15768)
DNA (3246bp) protein (1082aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta id=2723035 bin=GWC1_OD1_38_17 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_13
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(16527..17711)
DNA (1185bp) protein (395aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Putative uncharacterized protein id=3506690 bin=GWC1_OD1_38_17 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_14
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(17711..18301)
DNA (591bp) protein (197aa)
sodA; superoxide dismutase, iron/manganese-containing; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Superoxide dismutase, Fe-Mn family id=3506691 bin=GWC1_OD1_38_17 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
sodA; superoxide dismutase, iron/manganese-containing
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_15
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(18314..19519)
DNA (1206bp) protein (402aa)
DNA methylase N-4/N-6 domain-containing protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
DNA methylase N-4/N-6 domain protein id=2076573 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
DNA methylase N-4/N-6 domain-containing protein
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_16
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(19525..20307)
DNA (783bp) protein (261aa)
putative type II restriction enzyme Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Putative type II restriction enzyme id=4787960 bin=GWA2_CPR4_42_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
putative type II restriction enzyme
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_17
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(20304..20636)
DNA (333bp) protein (111aa)
Iron sulphur binding protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Iron sulphur binding protein id=3640286 bin=GWF2_OP3_38_59 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_18
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

21409..23091
DNA (1683bp) protein (561aa)
radical SAM family protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Putative uncharacterized protein id=4191496 bin=GWA2_Planctomycete_KSU_39_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_19
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(23133..24227)
DNA (1095bp) protein (365aa)
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Rod shape-determining protein RodA id=2723029 bin=GWC1_OD1_38_17 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
rod shape-determining protein RodA
RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_12902_20
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(24224..25006)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F1Y4_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Displaying 20 items

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