ggKbase home page

RIFCSPHIGHO2_01_FULL_OD1_51_74_rifcsphigho2_01_scaffold_1881_6

Organism: Candidatus Azambacteria bacterium RIFCSPHIGHO2_01_FULL_51_74

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 9 / 38 MC: 1
Location: comp(2217..2546)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 109.0
  • Bit_score: 205
  • Evalue 5.20e-50
transmembrane_regions id=5802149 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds) similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 105.0
  • Bit_score: 97
  • Evalue 1.10e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OD1_46_25 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGACAACAAATCCTTTTTACAACGCTCTCTCTGCGATCGCATACATCGCGACGCTCGTGACAACCGTCTTCTACGGGTCCAACCTCTTGGAGGGCGTCGTGGAAGAAAGCATCTTTCTCCCGATGGGCTTTCTCGCCACCTTCGTTCTTTCCGCGGCTCTCATGGGCTACTTCTTTCTCTATCAGCCGCTTCTCTTACTGCTCGACGGACATCGAGAAAAAGGAGTAAAACTCTTTTTAGAGACAGTCGGGATATTCGCCGTAGCGACGGTGCTCGTGATCGTCATCGCACTCATCGTAGGTAGCCTCGGCATTGCAGGCTTAAAATAG
PROTEIN sequence
Length: 110
MTTNPFYNALSAIAYIATLVTTVFYGSNLLEGVVEESIFLPMGFLATFVLSAALMGYFFLYQPLLLLLDGHREKGVKLFLETVGIFAVATVLVIVIALIVGSLGIAGLK*