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RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_1
RIFOXYB1_FULL_OP11_Levybacteria_40_17_curated, Levybacteria, Microgenomates, Bacteria

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comp(2..151)
DNA (150bp) protein (50aa)
Tax=RIFOXYB1_FULL_OP11_Levybacteria_40_17_curated
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_2
RIFOXYB1_FULL_OP11_Levybacteria_40_17_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(199..318)
DNA (120bp) protein (40aa)
Tax=RIFOXYB1_FULL_OP11_Levybacteria_40_17_curated
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_3
GWB1_OP11_41_21, Levybacteria, Microgenomates, Bacteria

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comp(363..1571)
DNA (1209bp) protein (403aa)
DEAD/DEAH box helicase-like protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I1F5_9BACT id=72267 bin=ACD50 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
DEAD/DEAH RNA helicase {ECO:0000313|EMBL:KKS00595.1}; TaxID=1618465 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_41_21.;"
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_4
GWC1_OP11_40_19, Levybacteria, Microgenomates, Bacteria

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comp(1575..1832)
DNA (258bp) protein (86aa)
RNA-binding protein n=1 Tax=uncultured bacterium RepID=K2AB47_9BACT
RNA-binding protein {ECO:0000313|EMBL:KKR50914.1}; TaxID=1618466 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC1_40_19.;"
rbpA; RNA-binding protein
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_5
GWB1_OP11_41_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(2051..2437)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C271_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS00597.1}; TaxID=1618465 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_41_21.;"
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_6
RIFOXYB1_FULL_OP11_Levybacteria_40_17_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(2587..3099)
DNA (513bp) protein (171aa)
transmembrane_regions Tax=RIFOXYB1_FULL_OP11_Levybacteria_40_17_curated
transmembrane_regions id=5802162 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_7
RIFOXYB1_FULL_OP11_Levybacteria_40_17_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(3081..3626)
DNA (546bp) protein (182aa)
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYB1_FULL_OP11_Levybacteria_40_17_curated
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5095423 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
ECF subfamily RNA polymerase sigma factor
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_8
RIFOXYB1_FULL_OP11_Levybacteria_40_17_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(3732..4106)
DNA (375bp) protein (125aa)
hypothetical protein
transmembrane_regions Tax=RIFOXYB1_FULL_OP11_Levybacteria_40_17_curated
transmembrane_regions id=5802160 bin=PER_GWA2_38_35 species=PER_GWA2_38_35 genus=PER_GWA2_38_35 taxon_order=PER_GWA2_38_35 taxon_class=PER_GWA2_38_35 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_9
GWB1_OP11_41_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

4346..5434
DNA (1089bp) protein (363aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS01185.1}; TaxID=1618465 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_41_21.;"
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_10
GWB1_OP11_41_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(5616..6512)
DNA (897bp) protein (299aa)
Conserved hypothetical membrane protein, DUF6 family {ECO:0000313|EMBL:KKS01184.1}; TaxID=1618465 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_41_21
hypothetical protein id=15190460 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_11
GWB1_OP11_41_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(6523..6807)
DNA (285bp) protein (95aa)
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:KKS01183.1}; TaxID=1618465 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_41_21.;"
excinuclease ABC subunit C; K07461 putative endonuclease id=85607 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
excinuclease ABC subunit C
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_12
GWB1_OP11_41_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(6992..7423)
DNA (432bp) protein (144aa)
Rhodanese domain protein {ECO:0000313|EMBL:KKS01181.1}; TaxID=1618465 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_41_21.;"
rhodanese domain protein id=42032 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Rhodanese-like domain protein
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_13
GWB1_OP11_41_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(7435..7824)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS01180.1}; TaxID=1618465 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_41_21.;"
Uncharacterized protein id=4384147 bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_14
GWC2_OP11_40_7_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(7841..8179)
DNA (339bp) protein (113aa)
Rhodanese protein n=1 Tax=uncultured bacterium RepID=K2CM99_9BACT
Rhodanese-like protein {ECO:0000313|EMBL:KKR73171.1}; TaxID=1618468 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC2_40_7.;"
rhodanese-like protein
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_15
GWB1_OP11_41_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

8403..9581
DNA (1179bp) protein (393aa)
Major facilitator superfamily MFS_1 n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZBR4_ANACC
Major facilitator superfamily transporter {ECO:0000313|EMBL:KKS01178.1}; TaxID=1618465 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_41_21.;"
major facilitator superfamily MFS_1
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_16
GWB1_OP11_41_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(9570..10430)
DNA (861bp) protein (287aa)
Alpha/beta hydrolase family protein n=1 Tax=Leptospira kmetyi serovar Malaysia str. Bejo-Iso9 RepID=V6HQL0_9LEPT
Alpha/beta hydrolase {ECO:0000313|EMBL:KKS01177.1}; TaxID=1618465 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_41_21.;"
alpha/beta hydrolase fold protein
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_17
GWC1_OP11_40_19, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(10464..11870)
DNA (1407bp) protein (469aa)
ppg:PputGB1_1508 gltX; glutamyl-tRNA synthetase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=41748 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate-tRNA ligase {ECO:0000313|EMBL:KKR50903.1}; TaxID=1618466 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC1_40_19.;"
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_18
GWB1_OP11_41_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

11909..12940
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CM08_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS01175.1}; TaxID=1618465 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_41_21.;"
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_19
GWC2_OP11_40_7_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(12915..13853)
DNA (939bp) protein (313aa)
D-alanyl-D-alanine carboxypeptidase-like protein n=1 Tax=uncultured bacterium RepID=K2ASC4_9BACT
D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:KKR73176.1}; TaxID=1618468 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC2_40_7.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
RIFCSPHIGHO2_01_FULL_OP11_40_83_rifcsphigho2_01_scaffold_18090_20
GWB1_OP11_41_21, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(13853..14371)
DNA (519bp) protein (173aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2CXV0_9BACT
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KKS01173.1}; Flags: Fragment;; TaxID=1618465 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_41_21.;"
hypothetical protein
Displaying 20 items

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