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RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2..259
DNA (258bp) protein (86aa)
hypothetical protein id=75320 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

303..1319
DNA (1017bp) protein (339aa)
secretion protein HlyD; K02005 HlyD family secretion protein id=75323 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
secretion protein HlyD; K13888 macrolide-specific efflux protein MacA Tax=RBG_16_RIF_OP11_02_41_13_curated
RND family efflux transporter MFP subunit
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_3

Not on your lists

1288..1983
DNA (696bp) protein (232aa)
ABC transporter related; K02003 id=75324 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD62700.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative ABC transporter ATP-binding protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

1980..3182
DNA (1203bp) protein (401aa)
ABC transporter, permease protein; K02004 id=75318 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3201..3530
DNA (330bp) protein (110aa)
hypothetical protein id=75317 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3527..3838
DNA (312bp) protein (104aa)
hypothetical protein id=75315 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(3840..4769)
DNA (930bp) protein (310aa)
transmembrane_regions 26..45 id=75319 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
transmembrane_regions 26..45 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(4800..5384)
DNA (585bp) protein (195aa)
transmembrane_regions 5..27 id=75316 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
transmembrane_regions 5..27 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(5407..6546)
DNA (1140bp) protein (380aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2) Tax=RBG_16_RIF_OP11_02_41_13_curated
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AMG3_9BACT
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(6586..7185)
DNA (600bp) protein (200aa)
manganese/iron superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RBG_16_RIF_OP11_02_41_13_curated
Superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=uncultured bacterium RepID=K2ALX7_9BACT
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_11
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

7271..8320
DNA (1050bp) protein (350aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=75325 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
D-alanine-D-alanine ligase-like protein Tax=RBG_16_RIF_OP11_02_41_13_curated
D-alanine-D-alanine ligase-like protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_12
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

8304..9287
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BKX4_9BACT
SH3 type 3 domain-containing protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) Tax=RBG_16_RIF_OP11_02_41_13_curated
SH3 type 3 domain-containing protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_13
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(9284..11752)
DNA (2469bp) protein (823aa)
UniRef90_UPI00016B2080 clp protease ATP binding subunit n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2080 id=75326 bin=ACD52 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
chaperone ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RBG_16_RIF_OP11_02_41_13_curated
Clp protease ATP-binding protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_14
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(11776..12372)
DNA (597bp) protein (199aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Tax=RBG_16_RIF_OP11_02_41_13_curated
HhH-GPD n=1 Tax=uncultured bacterium RepID=K2ALK2_9BACT
Fe-S cluster assembly protein HesB
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_15
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(12369..12839)
DNA (471bp) protein (157aa)
peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] Tax=RBG_16_RIF_OP11_02_41_13_curated
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Burkholderia RepID=D5WEN5_BURSC id=5086610 bin=GWF1_OP11_31_35_complete species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
peptidyl-prolyl cis-trans isomerase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_16
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(12836..13201)
DNA (366bp) protein (122aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain (Fragment) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V4R9_9AQUI id=53675 bin=ACD41 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
Two component transcriptional regulator, winged helix
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(13209..13781)
DNA (573bp) protein (191aa)
Membrane protein containing DUF457, transmembrane n=1 Tax=sediment metagenome RepID=D9PJL0_9ZZZZ
inner membrane protein YdjM; K07038 inner membrane protein Tax=RBG_16_RIF_OP11_02_41_13_curated
inner membrane protein YdjM
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_18
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(13795..14139)
DNA (345bp) protein (115aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_19
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(14179..15030)
DNA (852bp) protein (284aa)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
transmembrane_regions 218..235 id=22667 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_20
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(15083..15778)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8A6_CALAS id=5087273 bin=GWF1_OP11_31_35_complete species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_21
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

15831..17375
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DKV4_9BACT
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=RBG_16_RIF_OP11_02_41_13_curated
Mg chelatase subunit ChlI
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_22
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

17491..17874
DNA (384bp) protein (128aa)
endonuclease; K07460 putative endonuclease Tax=RBG_16_RIF_OP11_02_41_13_curated
endonuclease; K07460 putative endonuclease id=75097 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
endonuclease
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_23
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

17871..18746
DNA (876bp) protein (292aa)
DNA protecting protein DprA Tax=RBG_16_RIF_OP11_02_41_13_curated
transcriptional regulator, MarR family; K04096 DNA processing protein id=75098 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA protecting protein DprA
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_24
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

18761..19090
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AM31_9BACT
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_25
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(19079..19432)
DNA (354bp) protein (118aa)
seg 101..127 Tax=RBG_16_RIF_OP11_02_41_13_curated
seg 101..127 id=75091 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_26
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

19561..20490
DNA (930bp) protein (310aa)
seg 267..291 Tax=RBG_16_RIF_OP11_02_41_13_curated
seg 267..291 id=84976 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_27

Not on your lists

20624..21292
DNA (669bp) protein (223aa)
hypothetical protein id=84975 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD57548.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_28
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(21441..21815)
DNA (375bp) protein (125aa)
transcriptional modulator of MazE/toxin, MazF; K07171 id=84979 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
growth inhibitor protein Tax=RBG_16_RIF_OP11_02_41_13_curated
growth inhibitor protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_29
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(21805..22122)
DNA (318bp) protein (106aa)
coiled-coil 73..94 id=84977 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
coiled-coil 73..94 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_5279_30
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(22258..23316)
DNA (1059bp) protein (353aa)
cell envelope-related transcriptional attenuator Tax=RBG_16_RIF_OP11_02_41_13_curated
cell envelope-related transcriptional attenuator id=84978 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
cell envelope-related transcriptional attenuator
Displaying items 1-30 of 35 in total

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