ggKbase home page

RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_1
unknown

Not on your lists

1..117
DNA (117bp) protein (39aa)

This feature has no annotations

RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

135..710
DNA (576bp) protein (192aa)
Putative adenylyl cyclase CyaB n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSE0_9BACT id=75776 bin=ACD52 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
adenylyl cyclase CyaB Tax=RBG_16_RIF_OP11_02_41_13_curated
adenylyl cyclase CyaB
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(1017..1121)
DNA (105bp) protein (35aa)
hypothetical protein id=75783 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_4

Not on your lists

comp(1187..1348)
DNA (162bp) protein (54aa)
Uncharacterized protein {ECO:0000313|EMBL:EKE05210.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(1421..3241)
DNA (1821bp) protein (607aa)
UniRef90_A5KT16 Small GTP-binding protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT16_9BACT id=75773 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
bipA; GTP-binding protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(3290..3898)
DNA (609bp) protein (203aa)
transmembrane_regions 60..82 Tax=RBG_16_RIF_OP11_02_41_13_curated
transmembrane_regions 60..82 id=85010 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3957..4676
DNA (720bp) protein (240aa)
hypothetical protein; K07090 id=75774 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein; K07090 Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(4723..4842)
DNA (120bp) protein (40aa)
hypothetical protein id=75778 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_9

Not on your lists

comp(4851..5615)
DNA (765bp) protein (255aa)
inositol-phosphate phosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] id=75771 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD62045.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
histidinol phosphate phosphatase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_10

Not on your lists

comp(5617..6228)
DNA (612bp) protein (204aa)
NUDIX hydrolase n=1 Tax=Cellulomonas fimi ATCC 484 RepID=F4H6V6_CELFA id=75775 bin=ACD52 species=Cellulomonas fimi genus=Cellulomonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
NUDIX hydrolase {ECO:0000313|EMBL:EKD62044.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DNA mismatch repair protein MutT
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_11
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(6179..7111)
DNA (933bp) protein (311aa)
Oxidoreductase, aldo/keto reductase family Tax=RBG_16_RIF_OP11_02_41_13_curated
alcohol dehydrogenase related protein id=75782 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
aldo/keto reductase
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_12
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(7149..7829)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C2E6_9BACT
hypothetical protein
Uncharacterized protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_13
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

8136..9107
DNA (972bp) protein (324aa)
aldo/keto reductase (EC:1.-.-.-) Tax=RBG_16_RIF_OP11_02_41_13_curated
aldo/keto reductase (EC:1.-.-.-)
rsi:Runsl_1646 aldo/keto reductase id=1244547 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_14
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(9165..9788)
DNA (624bp) protein (208aa)
putative peptidase; K05995 dipeptidase E [EC:3.4.13.21] Tax=RBG_16_RIF_OP11_02_41_13_curated
peptidase, S51 family (EC:3.4.13.21)
Peptidase E n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WBK8_9ACTO id=75759 bin=ACD52 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_15
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(9851..10084)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YE58_9DELT id=75754 bin=ACD52 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
helix-turn-helix protein CopG Tax=RBG_16_RIF_OP11_02_41_13_curated
helix-turn-helix protein CopG
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_16
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(10062..10343)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNK3_9DELT id=75760 bin=ACD52 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein; K09803 hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(10380..10886)
DNA (507bp) protein (169aa)
NUDIX hydrolase id=75766 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
ADP-ribose pyrophosphatase Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_18
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(10890..11270)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB10_9SPHI id=75758 bin=ACD52 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
endoribonuclease L-PSP; K07567 TdcF protein Tax=RBG_16_RIF_OP11_02_41_13_curated
endoribonuclease L-PSP
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_19
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(11321..11680)
DNA (360bp) protein (120aa)
hypothetical protein id=75757 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_20
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(12110..12619)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Sulfuricurvum kujiense DSM 16994 RepID=E4U1Q8_SULKY id=75756 bin=ACD52 species=Sulfuricurvum kujiense genus=Sulfuricurvum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_21
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(12628..12897)
DNA (270bp) protein (90aa)
Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_22
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

13109..13684
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A1N2_9BACT
hypothetical protein; K07002 Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_23
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(13677..14843)
DNA (1167bp) protein (389aa)
pdi:BDI_1161 ATP-dependent RNA helicase DeaD; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] id=75767 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
putative DEAD/DEAH box helicase domain protein Tax=RBG_16_RIF_OP11_02_41_13_curated
ATP-dependent RNA helicase RhlE
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_24
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(15372..17129)
DNA (1758bp) protein (586aa)
cgt:cgR_2170 hypothetical protein; K06147 ATP-binding cassette, subfamily B, bacterial id=75751 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_25
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(17282..18031)
DNA (750bp) protein (250aa)
hypothetical protein id=75762 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_26
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(18114..18515)
DNA (402bp) protein (134aa)
hypothetical protein; K07117 id=75753 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein; K07117 Tax=RBG_16_RIF_OP11_02_41_13_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_27
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(18667..19326)
DNA (660bp) protein (220aa)
ntcA; global nitrogen regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein id=75752 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
cAMP-binding protein Tax=RBG_16_RIF_OP11_02_41_13_curated
cAMP-binding protein
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_28
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

19405..19788
DNA (384bp) protein (128aa)
seg 82..95 id=75763 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
seg 82..95 Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_29
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(19865..20401)
DNA (537bp) protein (179aa)
P-loop containing nucleoside triphosphate hydrolases id=75764 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
P-loop containing nucleoside triphosphate hydrolases Tax=RBG_16_RIF_OP11_02_41_13_curated
RIFCSPHIGHO2_01_FULL_OP11_42_80_rifcsphigho2_01_scaffold_4063_30
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

20428..21069
DNA (642bp) protein (214aa)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
transmembrane_regions 189..206 id=75755 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Displaying items 1-30 of 39 in total

View Taxonomy