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RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335

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Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_1
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(3..1076)
DNA (1074bp) protein (358aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_2
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(1189..2553)
DNA (1365bp) protein (455aa)
Replicative DNA helicase Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
Replicative DNA helicase id=2440393 bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Replicative DNA helicase
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_3
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(2582..4009)
DNA (1428bp) protein (476aa)
dnaX; DNA polymerase III (gamma and tau subunits) (EC:2.7.7.7) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSU9_9BACT
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_4
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(4083..4595)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PNT3_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_5
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(4718..5212)
DNA (495bp) protein (165aa)
50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 id=5226629 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_6
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(5230..5760)
DNA (531bp) protein (177aa)
rplJ; 50S ribosomal protein L10 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
50S ribosomal protein L10 id=4440227 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
50S ribosomal protein L10
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_7
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(5967..7904)
DNA (1938bp) protein (646aa)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
Thymidylate kinase id=2440632 bin=GWC2_TM7_44_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Thymidylate kinase
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_8
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(7901..8605)
DNA (705bp) protein (235aa)
deoxycytidine triphosphate deaminase n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21A7
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
deoxycytidine triphosphate deaminase
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_9
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(8683..9651)
DNA (969bp) protein (323aa)
rplA; 50S ribosomal protein L1 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
Ribosomal protein L1
id=5226638 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_10
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(9652..9915)
DNA (264bp) protein (88aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_11
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(9912..10343)
DNA (432bp) protein (144aa)
rplK; ribosomal protein L11 (BL11) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
50S ribosomal protein L11
50S ribosomal protein L11 id=5226642 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_12
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(10347..10892)
DNA (546bp) protein (182aa)
nusG; transcription antitermination factor Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
Transcription antitermination protein nusG id=4440249 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
nusG; transcription antitermination factor
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_13
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(10905..11309)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RVR2_9BACT
preprotein translocase subunit SecE
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_14
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11392..12105)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:157 RepID=R5WR37_9BACT
hypothetical protein; K07043 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_15
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(12109..12768)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0H3_DEHLB
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
hypothetical protein
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_16
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(13069..13272)
DNA (204bp) protein (68aa)
rpmG; 50S ribosomal protein L33 2 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
hypothetical protein cdiviTM7_01327 id=2440680 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
rpmG; 50S ribosomal protein L33 2
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_17
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(13348..13542)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI00035EDF48
putative stress-responsive transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
stress-responsive transcriptional regulator
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_18
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(13642..14694)
DNA (1053bp) protein (351aa)
id=5099550 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
id=5099550 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_19
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(14734..14880)
DNA (147bp) protein (49aa)
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_20
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15006..15395)
DNA (390bp) protein (130aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
hypothetical protein id=15188739 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_21
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15571..16224)
DNA (654bp) protein (218aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
hypothetical protein
hypothetical protein cdivTM7_00881 id=5226661 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_22
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(16246..17121)
DNA (876bp) protein (292aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A325_NATTJ
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_23
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(17118..17996)
DNA (879bp) protein (293aa)
Ribosomal large subunit pseudouridine synthase, RluD subfamily protein, nonfunctional n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RY91_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
ribosomal large subunit pseudouridine synthase, RluD subfamily protein, nonfunctional
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_24
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(17997..19031)
DNA (1035bp) protein (345aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PY42_9BACT
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_25
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(19083..19484)
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2481
MCYN0095; 30S ribosomal protein S9 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
ribosomal protein S9
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_26
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(19484..19930)
DNA (447bp) protein (149aa)
50S ribosomal protein L13 n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PU39_KRIFD
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
50S ribosomal protein L13
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_27
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(19927..20391)
DNA (465bp) protein (155aa)
50S ribosomal protein L17 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PM21_9BACT
rplQ; ribosomal protein L17 (BL15) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
rplQ; ribosomal protein L17 (BL15)
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_28
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(20396..21343)
DNA (948bp) protein (316aa)
rpoA; RNA polymerase (alpha subunit) (EC:2.7.7.6) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
DNA-directed RNA polymerase subunit alpha, partial id=2440932 bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
DNA-directed RNA polymerase subunit alpha, nonfunctional
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_29
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(21360..21974)
DNA (615bp) protein (205aa)
rpsD; 30S ribosomal subunit protein S4 Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
ribosomal protein S4 id=2440936 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
ribosomal protein S4
RIFCSPHIGHO2_01_FULL_Saccharibacteria_48_12_rifcsphigho2_01_scaffold_1335_30
RHI_Saccharibacteria_48_21, Candidatus Saccharibacteria, Bacteria

Not on your lists


comp(21984..22481)
DNA (498bp) protein (166aa)
30S ribosomal protein S11 n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PZK7_9BACT
rpsK; ribosomal protein S11 (BS11) Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_48_21_curated
rpsK; ribosomal protein S11 (BS11)
Displaying items 1-30 of 61 in total

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