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RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_trna_2
unknown

Not on your lists

comp(16..90)
DNA (75bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_1
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(96..368)
DNA (273bp) protein (91aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Putative uncharacterized protein id=4968538 bin=GWA2_CPR4_42_17 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_trna_1
unknown

Not on your lists

comp(412..483)
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_2
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(474..1106)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FAK5_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_3

Not on your lists

comp(1156..1389)
DNA (234bp) protein (78aa)
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:KKR31328.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
glutaredoxin-like protein, YruB-family id=5226974 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
glutaredoxin-like protein, YruB-family
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_4
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(1424..1798)
DNA (375bp) protein (125aa)
transmembrane_regions Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
transmembrane_regions id=5803575 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_5
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(1997..2548)
DNA (552bp) protein (184aa)
disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB id=5048257 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
disulfide bond formation protein DsbB
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_6
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(2553..2927)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DN97_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Vitamin K epoxide reductase
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_7
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(3052..3591)
DNA (540bp) protein (180aa)
PaaX family transcriptional regulator; K02616 phenylacetic acid degradation operon negative regulatory protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
PaaX family transcriptional regulator; K02616 phenylacetic acid degradation operon negative regulatory protein id=5803579 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
PaaX family transcriptional regulator
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_8

Not on your lists

comp(3745..4254)
DNA (510bp) protein (170aa)
MutT/nudix family protein {ECO:0000313|EMBL:KKR31333.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
ADP-ribose pyrophosphatase id=2136341 bin=GWD2_CPR2_39_7 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_9

Not on your lists

comp(4277..6820)
DNA (2544bp) protein (848aa)
Protein translocase subunit SecA {ECO:0000313|EMBL:KKR45391.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
Protein translocase subunit SecA; K03070 preprotein translocase subunit SecA id=5803033 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_10
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

6827..7045
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_11
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(7477..9654)
DNA (2178bp) protein (726aa)
TPR Domain containing protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
TPR domain-containing protein id=5803035 bin=OD1_GWC2_34_28 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
TPR Domain containing protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_12
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

9724..10824
DNA (1101bp) protein (367aa)
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
GDP-mannose 4,6-dehydratase n=1 Tax=uncultured bacterium RepID=K2F4G4_9BACT
GDP-mannose 4,6-dehydratase
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_13
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

10821..11765
DNA (945bp) protein (315aa)
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
GDP-L-fucose synthetase (EC:1.1.1.271)
GDP-L-fucose synthase n=1 Tax=Caldibacillus debilis RepID=UPI000373C668
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_14
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

11787..12623
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00036DC495
ABC-2 type transporter Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
ABC-2 type transporter
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_15
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

12637..13047
DNA (411bp) protein (137aa)
GTP-binding signal recognition particle Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Putative uncharacterized protein id=2723044 bin=GWC1_OD1_38_17 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
GTP-binding signal recognition particle
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_9173_16

Not on your lists

13101..13190
DNA (90bp) protein (30aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:KKR45385.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
Displaying 18 items

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